Zingiber officinale (ginger): 121985018
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Entry
121985018 CDS
T08725
Name
(RefSeq) eukaryotic translation initiation factor 5B-like
KO
K03243
translation initiation factor 5B
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
zof03012
]
121985018
Translation factors [BR:
zof03012
]
Eukaryotic type
Initiation factors
eIF-5
121985018
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
Roc
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
121985018
NCBI-ProteinID:
XP_042394188
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All DBs
Position
5B:92467841..92492001
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AA seq
1360 aa
AA seq
DB search
MGRKKNVTINDDEYSLAEEQQQPSPANHEAVAESLPAAGSKKSKKGGKNQRNDAFADETP
DVLSTASAADPSREDEGDGAPLVFSGKKKSSKSKKTNTVAGGFAALTALGDEADDQEPEE
KPTSEVKPESGLYADDEVDESRDFGVESSRQVNLEDADSRKQQKKKKKGGRSAREEEDLV
KLLADLGEAPAPGPSESQMVDEVNVPGAELSEQAIISEVADTKKQQKKKKKKGGRNAQEE
EDLEKLLLELGEAPAAGNSVSHEVDESTAPDEELSEQVISEIADSKKQQKKKKKKSGRNA
QEEEDLEKLLLELGEAPAAAPTQTLPPMLVANDGEEINDPELDSQKPGNGAEEFASKKQQ
KKKKKKSGKTAQEEEDLDKILAELGEGPPPLLPSVEAPGPSSQVVQESVLAPVEQPEVED
KDGEIEGESAAAKKKKKKKEKKAAAAATPSVPAAKDEKNDEAKGKVPDKKLPKHVREMQE
ALVRRKEAEERKKREEEEKLRKEEEERKRLEELERQAEEVKRRKKEREKEKLLKKKQEGK
LLTAKQKDEQRRLEAMRKQFLSQNEIMGGDALTEIKKRPRYNTKKPKQVQPKAAETDKAM
ENENEVDEPGMLQVGEDAIIEEELHSQVGDTEDKVEGDQVAEDVKALDEDEDDEEWDAKS
WDDLDVTLPTTSPFSEEDQEATRKPVVKGNTEREGNSSLELQANPEASAKLAVKKVVLPQ
KSTETIEANQGVEGESESVKDVKKTKEAFNKQESTDVEGNSKKSGPDLRSPICCILGHVD
TGKTKLLDCIRRTNVQEGEAGGITQQIGATYFPTENIRERTRELKADATLKVPGLLVIDT
PGHESFANLRSRGSSLCDIAIVVVDIMHGLEQQTIESLNLLKSRNTEFIVALNKVDRLYG
WKSCPNAPIAKTLKQQSNDVMNEFNMRLVQIITQFKEQGLNTALYYKNREMGETFNIVPT
SAVSGEGIPDLLLLLVQWAQKTMEDKLTFVDEVQCTVLEVKVIEGLGTTIDVVLVNGVLH
EGDQIVVCGMQGPIVTSIRALLTPHPMKELRVKGSYLHHKELKAAQGVKISAQGLEHAIA
GTSLYVVKPEDDLEELKKIVMQDVEKVMSRIDKSGEGVYVQASTLGSLEALTEFLRSPAV
NIPFCDFSIGPVHKKDVMKASVMLERKKEYATILAFDVKVMADARELAEESGVRIFVADI
IYHLFDQFKAYIDNLREEKKKESAEEAVFPCVLKIMPNCIFNKKDPIVLGVDIIEGILKV
GTPICIPSREFIDIGRIASIEINHKQVDVAKKGQKVAIKIVGTSPEEQQKMFGRHFEIDD
ELVSHISRRSIDILKANYRDDLTNDEWRLVVRLKTIFKLP
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggaagaagaacgttaccatcaacgacgacgagtactcgttggcggaggagcag
cagcagccgtcgccggcgaatcatgaagcagtggcggaaagtctccccgccgcaggctca
aagaagagtaagaagggaggaaagaaccagcgcaacgacgccttcgcagatgagaccccg
gatgtgctttccactgcgtcggccgccgatccttctcgagaggacgaaggtgatggcgcc
cccttagtcttctccggtaagaagaaatcctctaagtctaagaagactaacactgttgcg
ggtgggttcgccgcccttactgcattgggggacgaggcggacgatcaggagccggaagag
aaaccgacatcggaggtcaaacctgagtctggcctctatgcggatgatgaagtggatgaa
agcagggattttggcgtggaatcaagccgccaggtaaatttggaggatgcagattcaagg
aagcaacagaagaagaaaaagaagggaggacggtctgctcgggaggaggaggacttggtt
aaactccttgccgatctgggtgaagctcccgcaccaggcccttctgaatcgcaaatggtg
gacgaagtcaatgttcctggagcagaactaagcgaacaggcaataatcagtgaggtcgct
gatacaaagaagcaacagaagaagaaaaagaaaaagggtggacggaatgcccaagaggag
gaggatttagaaaaactcctgcttgagctaggagaagcccccgcagcaggcaattctgta
tcacatgaggtggacgaaagcacagcacctgatgaggaattgagtgaacaggtaatcagt
gagattgctgattcaaagaagcaacagaagaagaaaaagaaaaaaagtggacggaatgct
caagaggaggaggatttagaaaaactcctgcttgagctaggtgaagcccctgctgctgct
ccaacgcaaacattgcctccaatgttagttgcgaatgatggagaggagatcaatgatcca
gaacttgactcccaaaagccagggaatggagctgaggaatttgcctcgaagaagcagcag
aagaaaaagaaaaagaagagtggaaaaactgctcaggaggaggaagacttggataagatt
cttgctgaacttggggagggtccaccaccgctgctaccgagtgtggaagctccaggaccg
tcttctcaggtggtgcaggaatcagttttagcccctgtagaacagccagaggtagaggat
aaagatggtgagattgagggtgagtcagcagctgctaagaagaagaagaagaagaaagag
aagaaggctgcagctgctgcaactccatctgttcccgccgctaaggatgagaagaacgat
gaagcaaagggaaaggttccagacaagaagttacccaagcatgtgagggagatgcaggaa
gcactggtgaggaggaaggaagcggaagagaggaagaagagagaagaggaggagaagctg
agaaaggaggaggaagaaagaaagcggctagaggaattggagagacaagcggaggaggta
aaaaggagaaagaaggaaagggaaaaggagaaattgctgaagaagaaacaggagggcaag
cttttgacggctaagcagaaagatgagcagagaaggttagaggcaatgaggaaacaattc
ctttctcagaatgaaattatgggaggtgacgcacttacagagataaaaaaaagacctagg
tataatacaaagaagcctaagcaggttcaacctaaggctgctgaaacagacaaagcgatg
gagaacgagaatgaagttgatgaacctggtatgctgcaagttggggaagatgctataatt
gaagaggaattgcactctcaagttggggacactgaggacaaagttgaaggagatcaggtc
gcagaagatgtcaaagctttggatgaggatgaagacgacgaagaatgggatgcaaagagt
tgggatgatcttgatgttacattgcccactacaagccctttttctgaagaggatcaggaa
gccacaagaaaacctgtggttaaaggaaatactgaacgggaaggaaactcttctttggaa
ctccaagcaaatcctgaggcatctgcaaagcttgctgtaaaaaaggttgtgctgccccag
aaatctacggagactattgaggctaatcaaggggttgaaggagaaagtgaatctgttaag
gatgttaaaaaaacaaaagaagcttttaataagcaagagtcaactgatgtggagggtaat
tccaagaaaagtggccctgatctccgctcaccaatctgttgcattcttggccatgtagat
actgggaagaccaagctcttagattgcatccgacgcaccaatgtacaggaaggagaagct
ggtggtatcacccagcagattggggctacatattttccaacagaaaatataagggaaaga
acaagagagctaaaggctgatgcaacgctgaaggttccaggcttacttgtcattgatacc
ccagggcatgaatcctttgccaatctacggtctagaggttcaagcctgtgtgatattgct
atagtggttgttgatattatgcatgggcttgaacaacaaactattgaatcacttaacctt
ttaaaaagcaggaatacagagtttattgttgcactaaataaggtggatcgactttatggt
tggaaatcttgcccaaatgcacccattgccaagacactcaaacaacagtctaacgatgta
atgaatgaattcaatatgaggcttgtgcagattataacccaattcaaggagcagggcttg
aacactgctctgtactacaagaatagagaaatgggtgaaacatttaacatagttcccact
agtgcagtcagtggtgaaggtataccagatcttctcttattgttggtgcagtgggcacaa
aaaacaatggaagataaacttacttttgttgatgaagtgcagtgtacggtgttggaggtt
aaagtgattgaaggcttagggacaaccatagatgttgtactagtgaatggtgttcttcat
gagggtgatcagatagttgtttgtggaatgcagggccccattgtgaccagtattagagct
ttgctgactccccatcctatgaaggagctccgagtgaagggctcgtacttgcatcacaaa
gagctcaaagcagcccaaggtgtaaagatttctgcacagggccttgagcatgccattgct
ggcacatccttgtatgtggtaaaacctgaagatgatttggaagaattgaagaaaattgta
atgcaggacgtggaaaaggtaatgagccgaattgacaagagcggggaaggtgtttatgta
caagcgtcaactcttgggtcgttggaggcacttactgaattcttgagaagcccagcggtg
aatattcctttctgtgattttagcataggtccagtgcacaagaaggatgtcatgaaggct
agtgttatgcttgaaaggaagaaagaatatgcaaccattttagcttttgatgttaaagtc
atggctgatgctcgagagcttgcagaggagtctggtgttagaatctttgttgcagacatt
atatatcatctgtttgatcagttcaaagcttatattgataatctaagagaagaaaagaaa
aaggaaagtgctgaagaggcagtttttccttgtgttctaaagatcatgccaaactgcatc
ttcaacaagaaagatccaattgtgttgggcgtggatattattgaaggaatccttaaggta
ggtacacccatttgtataccttcaagagaattcatagacataggcagaatcgcatcaatt
gagattaatcacaagcaggtagatgttgcaaagaaaggacagaaggttgccatcaagata
gtcggcaccagtcctgaagagcagcagaaaatgtttggcaggcattttgaaattgatgat
gagcttgtcagtcatatctcaaggagatcgattgacatattgaaagcaaactatagggat
gatttgacaaatgacgagtggaggcttgtggtaaggttaaagacaattttcaagttaccc
tga
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