Zingiber officinale (ginger): 121985058
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Entry
121985058 CDS
T08725
Name
(RefSeq) transcription elongation factor TFIIS-like
KO
K03145
transcription elongation factor S-II
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
121985058
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
121985058
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
ChuX_HutX
HVO_0758
Motif
Other DBs
NCBI-GeneID:
121985058
NCBI-ProteinID:
XP_042394244
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Position
5B:complement(94949984..94954543)
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AA seq
389 aa
AA seq
DB search
MEKELLETFEVAKKAADVAAEAGSGSTEVDRCVDALKQLRRIPVTMQDLVETQVGKRLRY
LTKHHHSKIQVEASALLEYWKNIVIQETSNSKKNGSLENKISTKNSKPERKETIKIDKAP
KAGSVTIDRRNPTSESPKLNKKDADLGFKTEISHSERNMIENNRSNKSGLHTSANNTERI
SKGENQASTTKRPSPASSAHPPKLTTMVKCNDPTRDKIRELLAEAFSKVPQETGQDDREE
VRNILDEVDACDPIRVAVTVESMMFEKLGRSTGSQKLKYRSIMFNLKDGNNTDLRRKVLL
GEVKPERLVAMTPDQMASDKRKLANEQIKEKALFDCERGGAPKATTDQFKCGRCGQRKCT
YYQLQTRSADEPMTTFVTCVNCNNHWKFC
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagagctactcgagaccttcgaggtcgcgaagaaggcggccgacgtggcggcg
gaggctggaagtgggtcgactgaggtggatcggtgcgtcgacgcgctgaagcagctgagg
aggatccccgtcacgatgcaagatctggtggaaactcaggtaggcaaacgccttcgctat
ctgaccaaacatcatcattcaaagatacaagttgaggcttctgccctcttagaatattgg
aagaatattgtcattcaggagacatcaaattcgaagaaaaatggcagtttggagaataaa
atctcaacaaaaaattccaaaccagagagaaaagaaactatcaagattgacaaggcaccc
aaagctgggtcagttaccatagatcgcagaaatccaacttcagaaagccccaaattgaat
aagaaagatgctgacctggggtttaaaactgagatttcccattcagaaagaaacatgatt
gagaataatagaagcaataaatctgggcttcacactagcgccaacaacacggaaagaatc
tccaagggagaaaatcaagcttccacaaccaagaggccatctcctgcttcttcagctcat
ccaccgaagctgacaaccatggttaaatgtaatgatcctacgcgtgacaaaatccgggaa
cttctagctgaagctttctctaaagttccgcaagagaccggtcaagatgatagggaagaa
gtgagaaacatcctggacgaagtggatgcctgtgatcccatcagagttgctgtcacggtg
gagtcaatgatgtttgaaaaacttggtagatccactggttctcagaagcttaaatatagg
tccataatgttcaacttgaaggatggcaacaacactgatcttcgaaggaaagttctcctt
ggagaggtgaagcctgagagactagtggctatgactcccgatcagatggccagcgacaag
cggaaacttgcaaatgagcaaatcaaagagaaggccttatttgactgcgagaggggtggg
gctccaaaggctaccactgatcagttcaaatgcggtcggtgtgggcagcggaagtgcaca
tactatcaactgcaaactcggagcgccgacgaaccaatgacgacattcgttacctgtgtc
aactgtaacaaccactggaagttctgttga
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