KEGG   Zingiber officinale (ginger): 121985313
Entry
121985313         CDS       T08725                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121985313
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zof03041]
    121985313
Spliceosome [BR:zof03041]
 Complex A
  U2 snRNP components
   U2 related factors
    121985313
 Complex B
    121985313
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 121985313
NCBI-ProteinID: XP_042394612
LinkDB
Position
5B:complement(108669643..108693412)
AA seq 306 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRLDNAIT
PGLDSQGQPMDPHKIQEHFENFYEDLFEELSKYGEIESLNVCDNLADHMVGNVYVQFREE
EHAANALRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKQISRE
LRRKLFGGSRRHRRSHSRSRSPHGHRGYEDRPVNRGHGRRHPDRDQYSEERIRKPRSRSP
GRRRNRSRSPGGRRNRSPIREGSAERRAKIEQWNREREQTEATRRNSEYTQNGQQNNDYP
HQDQES
NT seq 921 nt   +upstreamnt  +downstreamnt
atggctgagcacttggcttctatctttggaacggagaaggaccgggtgaactgccctttc
tacttcaagatcggagcttgtcgacacggagatcggtgctcgcgcctgcacaccaagccc
agtatcagccccaccctcctcctgtccaacatgtatcagcgtctcgacaacgccatcacc
cctggacttgactctcaaggtcagcccatggacccacacaagatccaggagcacttcgag
aatttttatgaagatctctttgaggagctaagcaagtatggggagattgaaagccttaac
gtttgtgacaatctggccgatcacatggttggtaatgtctatgttcagtttagagaggaa
gagcatgctgcaaatgcacttcgcaacctgactggaaggttttatgcagggcgcccaatt
attgtagatttctctcctgttactgatttccgagaggctacatgtaggcaatatgaagaa
aacacctgcaatcgaggtggatattgcaattttatgcatttgaaacaaattagcagggaa
ttgaggcggaaattgtttgggggaagcaggaggcaccgcagaagtcatagtagaagcaga
agccctcatggccaccgtggttatgaagatcgtcctgtaaaccgtggtcatggtaggcgt
catcctgatagggatcaatactctgaagaacgtatcagaaaacccaggagtcgtagccca
ggtcgtagaaggaaccgcagtagaagccctggaggaagaaggaacagaagtcctattaga
gaaggaagtgccgagcgaagggctaaaattgagcaatggaacagggaaagggaacagacc
gaagctactagaaggaacagcgaatacactcaaaacggccagcagaataatgactatcct
catcaggatcaagaaagttga

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