Zingiber officinale (ginger): 121985336
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Entry
121985336 CDS
T08725
Name
(RefSeq) protein CHROMATIN REMODELING 19-like isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
121985336
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121985336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Terminase_2
SWI2_SNF2
AAA_22
Motif
Other DBs
NCBI-GeneID:
121985336
NCBI-ProteinID:
XP_042394653
LinkDB
All DBs
Position
5B:complement(109922227..109986704)
Genome browser
AA seq
759 aa
AA seq
DB search
MRRAFDEISDDEWENHTFKPSKVLKRTNLPSLPPIESFAYQPHAPGGTGSHDSPVNLDDE
DEDVGDGDVKVTRSPHGCGSRGRRFVVDDDSDVDEVVEVRPAAPDDEEISWSEDEADVVE
EEATNLQEDLEVEEVDVVGRALRKCGKISSALREELYGSSISNCDRYAEVEASSCRIVTQ
EDIDAVFAREESDFEPSLKPYQIVGVNFLLLLYRKRIGGAILADEMGLGKTVQAVTYLNL
LKHLNNDRGPHLIVCPASVLENWKRELTRWCPSLSVLLFHGSGRTTYSKELTSLGKAGLP
PSFNVLLACYSLFERHSSQQRDDRKALKRWKWSCVLMDEAHVLKDKNSFRWKNLMAVAQN
ARQRLMLTGTPLQNDLHELWSLLEFMMPDIFSTGDVDLKKLLNAKDNDMISQIKSILGPF
ILRRLKSDVMQQLVPKIRHVHYVHMGSQQSMAYVNAINEYRAASQARVSKSSASASGVDL
LPKRQISNYFMQFRKIANHPLLVRHVYSDEDVVRVAEVLYPKGVFGFECSIERAIQEIKS
YNDFEIHQLLILHGDNDTKVTDEHILGSAKCQVLAELLPRLKKEGHRVLIFSQWTSMLNI
LEWALEVIGVTYRRMDGSTQVLERQTIVDTFNNDCSIFACLLSTRAGGQGLNLIGADTVI
IHDMDFNPQMDRQAEDRCHRIGQTKPVTIYSCLLTGLLPRILLMRTYMRLQGGNWFWMLQ
SLSLESSWIMKMFLKRLWEKFCHHLFSSEIYPNHKVNEI
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcgccttcgatgagatctccgatgacgagtgggagaatcacaccttcaagcct
tcgaaggtcctcaagaggaccaatctcccatctcttccccccatcgaatccttcgcctac
cagccccatgcccccgggggaaccgggtcacacgatagccccgttaatttggacgacgag
gacgaggatgtgggcgacggcgacgtaaaggtgacgcgttccccacatggctgcggcagt
cggggcaggcgattcgtagtggatgacgatagcgacgttgatgaagtggtcgaggtccgg
ccggctgcgcctgatgacgaagagatctcgtggtcagaggatgaagcagacgtcgtggaa
gaggaagcaacgaacctacaggaagacctagaagtagaagaggtggacgtcgttggtcga
gctctccgcaaatgtggcaagatatcatcagccctaagggaggagctttatggttcctcc
atttccaattgcgatagatatgctgaagttgaagcttcttcgtgcaggattgtcactcag
gaagatattgatgctgtttttgctcgtgaggaatctgattttgagccaagtttgaagcct
tatcagattgtaggtgtgaattttcttcttctgttgtacagaaaaagaatcggtggagcc
atcttggcagatgagatgggtcttggtaagacagtgcaggccgtgacatatctaaacttg
ctaaagcacttgaacaatgaccgaggtcctcacctaatcgtctgcccagcttcagtttta
gagaactggaaaagagaattgactaggtggtgtccatcactctctgtcttattatttcac
ggaagtgggagaacaacttattcaaaggaattaacctctcttggcaaggctggcttgcct
ccttccttcaatgtattacttgcatgctactcattgtttgaacgacacagctcacaacag
agagatgatcgtaaggcattgaagcgatggaaatggagttgtgttctaatggatgaagct
catgttttaaaggataagaatagcttccgatggaaaaaccttatggctgtagctcaaaat
gcacgacaacgcctaatgttaacaggaaccccacttcaaaatgatttacatgagttatgg
tcattgttagaatttatgatgcctgatattttttccactggggatgtggacctgaaaaag
ttgttgaatgcaaaagataatgatatgatctcacagataaaatccattttagggccattc
atattaaggcgcttgaagtccgatgttatgcagcaacttgttccaaagatacgacatgtt
cattatgttcacatgggctcgcaacagtctatggcatatgttaatgccataaatgaatac
cgtgcagcttcccaggctcgggtctcaaagtcttctgcttctgcatctggagttgatctg
ctccccaaacgtcaaatttccaattattttatgcagtttcgcaagattgcaaatcatcca
ttgctggttagacacgtgtacagtgatgaagatgttgttcgtgttgctgaagtgctgtat
ccaaagggtgtatttggttttgaatgtagcatagaaagagccatccaagagatcaagagt
tataatgattttgaaattcaccagctactaattttacatggtgacaatgacacaaaggtg
acagatgaacatatcttgggatcagctaagtgtcaggtcttggcagaactcctacctcgt
ttgaaaaaggaagggcacagagttctgatatttagtcaatggacatcaatgcttaacatt
ctagagtgggcattagaagttataggtgtaacttacagacgtatggatggaagtactcaa
gtgctagaaagacaaactatagtggataccttcaacaatgattgttccatatttgcatgc
ttgctctcaactagagctggaggacagggtcttaacttgattggagctgacacagttatc
attcatgatatggattttaacccacaaatggaccgacaagctgaggatcgttgtcatcgc
attggccaaactaagcctgttaccatttatagttgtctgttaacaggcttgttaccaagg
atactgttgatgagaacatatatgagattgcaaggcggaaattggttttggatgctgcag
tccttgagtctggaatcgagctggataatgaagatgttcctgaaaagactatgggagaaa
ttttgtcatcacttattctcatctgaaatttacccaaaccataaagtcaatgagatttga
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