Zingiber officinale (ginger): 121985350
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Entry
121985350 CDS
T08725
Name
(RefSeq) uncharacterized protein LOC121985350 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121985350
Membrane trafficking [BR:
zof04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121985350
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
121985350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lgl_C
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
Synaptobrevin
WD40_Prp19
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
121985350
NCBI-ProteinID:
XP_042394684
LinkDB
All DBs
Position
5B:complement(110894867..110924726)
Genome browser
AA seq
756 aa
AA seq
DB search
MQVLTLEWSSGVETLKCISRVNLNLNGSFADMILIPNDSISDSSTAALFVLTNPGQLSVY
DGNILSELNSDGDPSVFAENFPVVVPTIDPNMTVNKLCLLPKGSNSLKVLFKKFRMGRLP
SHTLSMGTKWPLTGGVPPEVSYEDYEVENFFIAGYQDGSVRIWDATYPVLVLMFVLEGKL
PAMEVEVTIPAVTALAFCPLSMTLAIGDECGLVRIYKLQENTNGSSFHFVTQTNQEVHMV
HHGQGFHCLAAFSILNSPITTIQLSNSGNNFVVGFHTGQVMVLDIASLAVLFCTDCALGT
KSTLISASSYAISQHVLQEISSKQPCSLADSIEVILTITKDSQIAIIDSKSGVIIGSRLL
QPNKEAVAVSIHVIEGSVTLPESITADLEKCSQNLPDETSQSENNELTEKKEQGYHLEDA
LYQYEVLKDPLLVICFTNAICFYSLKSAMEGNNNFTHKVNLSQKVCWSMTLKVDDMVSGL
VLLYETGTIEIRCLPGLEIKTETSLMSILRWSFKTNMGKTMSFSDDGNIALVNGCEVACI
SCWHNKSRFSESLPCLHDKVLAAAAEAAINQFVDLKRKQTTSPGIISGLIRGLKGGKTEN
DIKSDRILNYSSTAHLEELFSKFSFSDEPTTSTNADVGELRIDDIEIDDPLPVPSPSITV
NKNNSKDVKEREKLFQGSTKDIQPRMRSTQEIMTQYKFKGDAAAAAAHAREKLAERQEKL
ERISLRTAELQNDAENFSNLAHELAKTMENKKWWKL
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttcttactcttgaatggtcctctggagtagagactttaaagtgcatctcacgt
gtgaacctgaatcttaatggatcctttgcagatatgattctgatcccaaatgacagtata
tcagacagttccactgctgctctttttgtattaacgaaccctggccagttgagtgtctat
gatggtaatatcttatctgagttaaactctgatggggacccatctgtttttgctgaaaat
tttccagtagtggtgcctaccattgatccaaatatgactgtgaataaactttgtttgcta
cccaaaggcagcaactctttaaaagttttattcaagaaatttcgtatgggaaggttacct
tctcataccttatctatgggcacaaagtggcctcttactggtggggttcctcctgaagtg
tcctatgaagattatgaggttgaaaatttttttatagctggttatcaagatggatctgtg
agaatatgggatgctacatatcctgtactggttctgatgtttgtgttagaaggaaagctg
ccagctatggaagtggaggtgacaattcctgcagtaacagctcttgccttttgtcctttg
agtatgaccttggctatcggcgatgaatgtggtttggttaggatctataaacttcaagaa
aacaccaatggatcaagctttcactttgtgacccagacaaaccaggaagtacatatggtt
catcacggacagggatttcattgcctcgctgccttttctatcttaaactcacccattaca
accattcagttatccaattccggtaacaactttgttgtaggatttcatactggacaggta
atggtgcttgacattgcatcattagctgtactgttctgtacagattgtgcattgggaaca
aagtcaacactaatttctgcaagtagctatgctatttcccaacatgttctccaagaaatc
agttcaaagcaaccttgttctctggcagactctatagaggtgatactcaccatcaccaag
gattcacaaattgcaattattgatagcaaatctggggttattataggctccagattactt
caaccaaataaggaagccgttgcagtttccatccatgtaatagaaggctctgttacacta
cctgaatcaatcactgctgatcttgagaagtgctcccagaatctgccagatgaaacttct
caaagtgaaaacaatgagttgacagagaaaaaagaacaaggttatcacttggaggatgct
ctgtaccaatatgaagtgttaaaagatccactacttgtaatttgttttacaaatgccatc
tgtttctattcactgaagtctgcgatggagggaaataacaactttacccataaggtgaac
ctatcgcaaaaagtttgttggtcaatgactttaaaggtagatgatatggtatctggattg
gtgctcctatatgaaactggaacaattgagataaggtgtttacctggtctggaaattaaa
acagaaacctctttaatgtccatactccgctggagcttcaaaacaaacatgggcaaaacc
atgagtttttctgacgatgggaacattgctttggttaatggctgcgaagttgcttgcata
tcttgttggcataataaatccaggttctcagaatccttgccttgccttcatgacaaagtt
ctcgctgctgctgcagaagctgcaattaatcaatttgtagatttgaagagaaaacagact
acctccccagggataataagcggcctcataagaggacttaaaggaggtaaaacagagaat
gacatcaagagtgacagaatacttaactatagttccactgcacatttggaggaattgttc
tcaaaattctcattctcagacgaaccaactacttcaactaatgctgatgttggtgaattg
agaattgatgatattgagattgatgatccattacctgtgccatctccttcaataactgta
aacaaaaataatagcaaagatgtgaaggaaagagagaagttgtttcaaggatccaccaag
gatatacagccaagaatgagaagcactcaagaaattatgacccaatataaatttaagggg
gatgctgcggcagcagcagctcatgcaagagaaaaacttgcagagcggcaggagaaactt
gagagaattagcctacgtacagcagagcttcaaaatgatgctgaaaatttttcaaatttg
gctcatgaactagccaagacaatggagaataagaaatggtggaaactatga
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