Zingiber officinale (ginger): 121985436
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Entry
121985436 CDS
T08725
Name
(RefSeq) AUGMIN subunit 6-like
KO
K16589
HAUS augmin-like complex subunit 6
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
121985436
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centrosome formation proteins
Augmin complex
121985436
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAUS6_N
SNAPC5
DUF6612
Spore_III_AB
RHINO
DUF3450
Motif
Other DBs
NCBI-GeneID:
121985436
NCBI-ProteinID:
XP_042394829
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Position
5B:115006420..115019498
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AA seq
706 aa
AA seq
DB search
MSTDREKEREAELESAMYTNCLLLGLDPSVLGVGQAGGGPFAGHFRHSNPKLGEQLLYFL
LCALRGSAKEFDRVWPIFDSAQSRDFRKIVQGIISELESQGVLPRSNSRVSSLATCCGPR
FVELLWQLSVHALREVHQRTFADDISSNSLPPVLTEASYQNAAALLQVTKARIALERRKF
MEKANAAVHRQSAWSNLAHEMTAEFRSLCAEEAYLQQELEKLQDMLNKAKVEGESFDDHI
SSSLGQNSHLIAKATRLWESLLARRSQHEILASGPIEDLIALREHRYRISGSALLAATDQ
SSHIPSSDAMSVSSDEVSSHGGIREHMDSLHCQGKINTLSKMVDKGVAPPTVDVAEVFRR
WTHALQRIHKHSLHLVKANDGEGPELLQTSSNSSTSGHGMSMAATLAEHHQHLVSIQGLV
SQLKEAIPSMQKSIAELTEEVNISSTTMDGFSARSTLSTQSQVPQGVANDEIDDLNSRLS
SIQSEKVSTSSVLKLPHLISVAPNSSAKSMHTAKQSSAPESVQEYFPTVTSVTPQIAHDH
ADENGNNDVRSIRRSVRESALSGLANNSKLRKDRSNDHGSQHYFLPMSTGASLVEVDASP
IENKRGVFPPPEIHVPSSYRHPLKTDSQLDSHATLSDNSLGIHGHTSLQSLTQSPIVNLK
NPLLDINDSLDQVYSPPFLMDSSFFQDAYEDLLAPLSETEVALIDY
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggatcgagagaaggagcgggaggcggagctcgagagcgccatgtacaccaat
tgcctcctcctcggcctcgatccctccgtccttggtgtcggtcaggccggcggcggcccc
ttcgcggggcatttccgccactccaatcccaagttgggcgagcagctcctctacttcctc
ctctgcgccctccgaggctctgccaaggaatttgatagggtatggcctatcttcgattcc
gcccaatctcgagatttccggaagattgtgcaagggataatcagtgagctagagtcgcaa
ggcgtgctgcctcggagtaattctagggtttcttctctcgcaacttgctgcgggccaaga
ttcgtggagcttctttggcaactttctgtgcatgctctgcgagaagttcatcagcggaca
tttgctgatgatatatcttctaattctctgcctccagtattgacagaagcttcttatcaa
aatgctgctgcattgcttcaagtgactaaggctagaatagctcttgagagaaggaaattt
atggaaaaagcaaatgctgctgttcatagacaatctgcttggtcaaatttagcccatgaa
atgacagcagaatttcgtagcctttgtgcagaagaggcctatttgcaacaagagttggaa
aaactgcaggacatgctaaacaaagctaaagtggaaggggagtcctttgatgatcacatt
tccagctctcttggtcagaattcacacttgattgccaaagctactcgtctatgggaatca
ttattagctcgaaggagccaacatgaaattttagcttctggcccaatcgaggatttgatt
gcccttcgtgaacatagatatcgaatctccggctcagctttgcttgcagctacggatcaa
agttcacatattccatcttcagatgccatgtccgtttcttctgatgaggtttcttcacat
ggaggtattagggaacatatggattcacttcattgccaaggtaaaattaacactctctcg
aagatggtcgataaaggtgtagctccaccaacagttgatgttgctgaagtttttagacgg
tggactcatgctttacaacgtattcataaacattctcttcatctggtcaaggctaatgat
ggagagggcccagagctacttcagacttcatctaatagtagtaccagtggtcatggcatg
tcaatggcagcaactcttgctgaacatcaccaacatctagttagcatacaaggactagtt
agtcaactaaaagaggcaattccatcgatgcagaaatccattgcagagcttactgaagaa
gtaaatatttcttcaactacaatggacgggtttagtgcaaggtcaactttaagcacgcag
tcccaagtgcctcaaggcgttgctaatgacgaaattgatgacttgaattctagactctct
tccattcagtctgagaaagtttccaccagttctgttttgaaactccctcatttgatcagt
gtggccccaaattcgtcggcaaaaagcatgcacacagcaaagcagtcaagtgctcctgaa
tccgtccaggaatatttccccacggtcacatcagtgacaccacagattgcacatgatcat
gcagatgagaatggcaataatgatgttcggagtattagacgttctgttcgtgaatcagca
ctgtcaggactggcaaacaactcaaaattgcgaaaagatagaagcaacgatcatggttct
caacactacttcttgcctatgtctacaggagcttctctagtagaagtagatgcctctcct
attgaaaacaaacgaggagtctttccaccaccagaaattcatgttcccagcagttacaga
catccactaaaaactgacagccaactagattctcatgccactttatccgacaattcactt
ggaatccatggtcacacatctctgcaaagcttaacccagtcacccattgttaacttgaaa
aaccctcttctcgacatcaatgattctctggatcaagtttactcgcctccatttcttatg
gattcatcattcttccaggatgcatacgaggacttgctcgccccattatctgaaactgaa
gttgccctaatagactactag
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