Zingiber officinale (ginger): 121985493
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Entry
121985493 CDS
T08725
Name
(RefSeq) oligoribonuclease-like
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121985493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121985493
03009 Ribosome biogenesis [BR:
zof03009
]
121985493
Messenger RNA biogenesis [BR:
zof03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
121985493
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
RNases
121985493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Dicer_PBD
Motif
Other DBs
NCBI-GeneID:
121985493
NCBI-ProteinID:
XP_042394915
LinkDB
All DBs
Position
5B:116936942..116947099
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AA seq
254 aa
AA seq
DB search
MNNLSNIFSTLRVDAEDDKEQIASLSVAKSEKRAENSDVTKTKNQFPRESTSTINDKLEQ
QMLPSPSGDYKMPLVWIDLEMTGLDIEVDRILEIACIITDGKLINSIDGPDFVIRQTKEC
LDKMGEWCCEHHASSGLTERVLRSTLTEADAENQVIDFVKKHVGSQTPQLAGNSIYVDFL
FLKKYMPSLAAIFSHVLVDVSSIVALCIRWFPKEKKKAPKKAKSHRAMNDIKESIQELKY
YKQAIFKASNNGKL
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatctttcaaatattttctctactcttagagtggatgctgaagatgacaaagaa
cagatagcttctctctcagtagccaaaagtgaaaaaagggctgaaaattcagatgtaaca
aagactaaaaatcaatttccaagggaaagtacaagcacaataaatgataagttagaacaa
caaatgcttccatcaccttcaggagactacaaaatgcctcttgtatggattgacttggaa
atgacaggtttggatattgaagttgatcggatattggagattgcatgcattataacagat
ggcaaattaatcaactcaattgatggtccagattttgttattagacagacaaaggaatgc
ttggataagatgggagaatggtgttgtgagcatcatgcatctagtggtttgacagagaga
gtgctgagaagtacactaacagaagcagatgcagaaaatcaagttatagactttgtgaag
aagcatgtgggctcacaaacccctcagttggctggaaattctatttatgtggattttctc
ttcttgaagaagtatatgccttctctggctgccatattttctcacgtgctagtcgatgtc
agcagcattgtggctttatgcatccgttggtttccaaaagagaaaaaaaaggcacccaaa
aaagccaaaagccatagagctatgaatgacataaaggagagcatccaggaactaaaatac
tacaagcaagccatcttcaaagcatcaaacaacggcaagctgtga
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