Zingiber officinale (ginger): 121985541
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Entry
121985541 CDS
T08725
Name
(RefSeq) tRNA modification GTPase MnmE-like isoform X1
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
121985541
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
121985541
Prokaryotic type
Methyltransferases
121985541
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GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
Ras
GTP_EFTU
Roc
AIG1
RsgA_GTPase
MMR_HSR1_Xtn
HopBA1
Motif
Other DBs
NCBI-GeneID:
121985541
NCBI-ProteinID:
XP_042394998
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Position
5B:118257791..118270265
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AA seq
544 aa
AA seq
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MALALFRCLAPFRRPSSIPLLLNPNPFNPFSFPKTLFLHSKTLVSRLSTEDTHQIVTKDE
RLRTEDGTALGWGTIVAIVTSMGGGPAAVGIVRLSGPTAVDVAARVFHPARGRKEGGSPF
LWKPRSHFVEYGFALDRKGNVIDEVLAVPMLAPRSYTREDVVELQCHGSDVCLNRVLKAC
LEAGAKLAEPGEFTLRAFLNGRLDLSQAENVGRLIAAKSVAAAESALANIQGGFSSLVKS
LRKQCIQLLTEIEARLDFDDELPLLEPRVLTNQVDDMWNILQEAIDTANYDKLLQTGLQV
AIIGRPNVGKSSLLNAWSKSERAIVTDIAGTTRDVIEANVSVHGIPITLLDTAGIRETND
VVEKIGVQRSESAAMTADVIIMVTNAIDGFTEDDRKLIDHIQKNQKSAGSATPVILVVNK
IDCVPCTSMRQFEMATSSFMKLVPTCAINGKGISELERAVLEVRGLDSIPPGGFRWTVNQ
RQFEQLLRAQESLSRLKSSIDDELPMDFWTIDLREAALALGEISGEDISEEVLSNIFSKF
CIGK
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggctctcgcgctcttccgctgcctcgcccctttcaggcgacccagttccattccgcta
ctcctaaaccctaatcctttcaatcctttctccttccccaaaacgctgtttctccattct
aaaacccttgtttctcgcctctccactgaagatacacaccaaattgtcaccaaggacgag
cgtcttcggacggaggatgggaccgccttggggtgggggaccatcgtggcaattgtcacc
tccatgggcggtggtccggccgccgtcggcatcgtccgattgtcgggtccaacagcggtt
gatgtagcagccagggtttttcatcccgccagggggcgtaaggaggggggttctcccttt
ttatggaagcccagaagccactttgtggagtatggattcgccttggaccgtaaaggcaat
gtcattgatgaggtcctagcagtccctatgttggcaccgcgctcatatactagagaagat
gtggttgagctccagtgccatgggagtgatgtatgcttgaatagagtattaaaagcatgc
ctagaggctggagcaaagctcgcagaaccaggggaatttacccttcgagcttttcttaat
ggacgcttggacctgtctcaggcagaaaatgtcggaagactgatagcagccaagtctgtg
gctgctgcagaatctgccttggcaaatatacagggaggcttttcctcacttgttaaatct
ttgagaaagcaatgcattcaactgcttacagaaattgaggctcgcttagattttgatgat
gaattgccccttctggaacctagggttctgacaaatcaggtagatgatatgtggaatatt
ctccaagaagcaattgatactgctaactatgacaaacttttacagactggtctccaggtt
gcaattattggtaggccaaatgttggaaaatcaagcttgctcaatgcttggagcaaaagt
gaaagagctatagttacggatattgctggaaccacaagggatgtcatagaagctaatgtg
agtgttcatggtattcccatcactcttcttgacactgctggaattcgagaaactaatgat
gttgttgaaaaaattggtgtacaaagatcagaatctgctgccatgactgcagacgtgata
attatggtaacaaatgctattgatggattcacagaggacgacaggaaacttattgatcat
attcaaaaaaatcagaagtcagcaggttccgcaacacctgtgattctagtggtcaataag
atagattgtgtaccatgcacctcaatgcgacaatttgaaatggctactagctccttcatg
aaacttgttccgacgtgcgccatcaatggaaaaggcatttcagaattggagagggctgtg
ttagaggtcaggggcctcgactcaattccaccaggagggtttagatggactgttaaccag
aggcaatttgagcaactactacgagcacaagaatctctttctagactgaagtcatcgatt
gacgacgagttgccaatggatttttggaccattgacttgagggaagcagcattggcccta
ggggagataagcggggaagacatctctgaagaagtcttatccaacatatttagcaaattt
tgcatcggaaaatga
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