Zingiber officinale (ginger): 121985599
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Entry
121985599 CDS
T08725
Name
(RefSeq) zinc finger CCCH domain-containing protein 36-like
KO
K27809
protein FRIGIDA-ESSENTIAL 1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
121985599
Transcription factors [BR:
zof03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
121985599
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
Torus
zf-CCCH
zf-CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
121985599
NCBI-ProteinID:
XP_042395093
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Position
5B:119690186..119699264
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AA seq
639 aa
AA seq
DB search
MPEPSPKSDRASPSLPLQVADSLADDCVPPEEDRREIGEEGERVAEEERDEGRRRDDEVN
DTSKKQEGCCKNPKSISSNSERSFVNSSNSHAQYFRDGDLGNGSPSKLHYKKTSEDKNEE
LCQPKKRPWSSPFIQHERENKNPAIVCDFFAQGWCIKGSSCRFLHKKEVVGDSGLETQEG
ISDMPISEYSTKPDFHLQRSLVRTYGKEMHGLSEFKSHDILHASKNFFDEHFQSGSGRTS
ALLGDEVRQESMFQRKNTITGLIPMVDFTADRYSTSGEISSRHFSNERMMYKEMPIGDHR
NDASSLTENPLISESVLFSGVSSTPIDVHRDSDDAYSFGEKPDDLSGQHRGSCFTIHDSS
CLTSFKSNFDNSTYSIQGSAATESLHSFAQAGTRFIHGLPVSDERGDVHTMLNHCSNFTT
YGQPNVAGDSLSRLQQNLEENTWENSIPFQPSFSFASFIESCSDSQFDPLGSNIGHPKEV
TTPVLAGDFKPGYDANKSANSFTSASDTATVAPGLTTNDEKGNIPRITDPAPINDAKVGN
NMRDVNNLDNNIMESKSMKMVYAALVDFLKELLKPWWKEGHLSRDTHKLIVKKTTEKVLG
ALQPHQVPNSPLSIQQYLSSSRPKLLKLVEAYVDKYTKS
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgccggaaccctcgccgaagtcggaccgtgcttctccctcacttccattgcaggttgct
gattccctggccgacgattgcgtgcccccggaagaggatcgaagggagatcggagaagag
ggcgagagagtggcggaagaggaacgagacgaggggcggcgacgcgatgacgaggtcaat
gatacaagcaaaaaacaggaaggctgttgcaagaatccaaagtcaatttcttccaattct
gagagatcttttgtcaattcatcaaattctcatgcccagtattttagggatggtgatctt
ggcaatggttctccatctaagttgcattacaaaaagacatctgaagacaaaaatgaagag
ctctgccaacctaaaaaaaggccatggagttctccttttattcagcatgaacgtgaaaat
aaaaatcctgcaattgtttgcgatttttttgctcaaggttggtgcatcaagggaagttct
tgtagatttcttcacaagaaagaggtggttggcgactctggtctggagacacaggaaggc
atatcggacatgccaatttcagaatattcaacaaaaccagatttccatttacaaaggtct
cttgtcagaacatacggcaaggaaatgcatggattgtctgaattcaagagccatgatatt
cttcatgcatcaaagaacttttttgatgagcattttcaatctggcagtggtaggacatct
gctctcctaggcgatgaagtaagacaggaatcaatgttccaaagaaaaaacacaataaca
ggactaatacctatggttgattttactgctgatagatactcaactagtggagagatttca
tcaagacatttttcaaatgaaagaatgatgtacaaggaaatgccaattggcgatcataga
aatgatgcatcttctttgacagaaaacccattaatttcagaatctgttttgttctctggt
gtatcatctacaccaatcgatgtccacagagatagcgacgatgcctattcttttggagaa
aagccagatgacctttctggacaacatcgagggagctgcttcacaattcatgattcttct
tgtctaacaagtttcaagtcaaattttgacaactctacttattcaattcagggatctgct
gcaactgagtcacttcattcatttgctcaagcaggcacaagatttattcatggacttcca
gtaagtgatgaacgcggagatgtccatacaatgttaaaccactgcagcaatttcactact
tatggacagccaaatgttgctggggattcgttgtctcggctgcaacaaaatcttgaagag
aacacttgggaaaactctataccttttcaaccgtcattttcctttgcttcttttattgaa
tcctgttccgatagccaatttgatccccttggcagcaacattggtcatccaaaagaagtc
acaactcctgtattagctggagattttaaaccaggatatgatgccaacaaatctgcaaat
tcttttacttctgctagcgacacagctactgtggctcctggtctcaccacaaatgacgag
aaagggaacatccctcgtattactgatcctgctcctattaatgatgcaaaagttggcaat
aacatgagagatgtaaacaatttagataataatattatggaatcaaagtcaatgaagatg
gtttatgcagctttggtggacttcttaaaggaattgctaaagccatggtggaaggagggt
cacttgagtagggatacccataagttgatagttaagaagacaacagagaaagtcttaggt
gcattgcaaccccatcaagtccctaatagcccgttgtcaatacaacaatatttatcctcc
tccaggccaaagcttttgaaactagtggaggcctatgtggataaatatactaaatcctga
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