Zingiber officinale (ginger): 121985603
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Entry
121985603 CDS
T08725
Name
(RefSeq) nuclear transcription factor Y subunit B-3-like
KO
K08065
nuclear transcription Y subunit beta
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
121985603
Transcription factors [BR:
zof03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
121985603
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Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
CENP-T_C
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
121985603
NCBI-ProteinID:
XP_042395097
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Position
5B:119765982..119767167
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AA seq
220 aa
AA seq
DB search
MADSDNESGGHNQGHSGAGAVGELSSPKEQDRFFLPIANVSRIMKKALPANAKISKDAKE
TVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFRET
EGEKGGGGPSSSSSTPHQQMDSVAASMGIGTNMPGYAAGAPAMYGGGMTMMMGQQMYAPQ
SSSSPYHLPQMTMSEKNSTASGGGFDGAGLNSSSSKPGYK
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcggataacgaatccggcgggcacaaccaaggccactcgggagcaggagcg
gtaggggagctatcgtcgccgaaggagcaggatcgcttcttcctgcccatcgccaacgtc
agccgcatcatgaagaaggcgctcccggcgaacgccaagatctccaaggacgccaaggag
actgtgcaggagtgcgtgtcggagttcatcagcttcatcacgggggaggcctccgacaag
tgccagcgcgagaagcgaaagaccataaacggcgacgacctcctctgggccatgaccacc
ctcggcttcgaggagtacgtcgagcctctcaaggtctacctgcagcgtttccgcgaaacg
gagggcgagaagggaggcggtggtccatcgtcgtcctcgtcgacgccgcaccagcagatg
gactccgtcgccgcctctatgggtatcgggaccaatatgcccggctacgctgccggcgcg
cctgccatgtacggtggcggaatgacgatgatgatggggcagcagatgtacgccccgcag
tcctcatcctcgccgtaccatcttccccagatgaccatgtcggaaaagaacagcacggcg
agcggtggcggcttcgacggcgccggtttgaactcctcctcctccaagccgggatataaa
tag
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