KEGG   Zingiber officinale (ginger): 121985613
Entry
121985613         CDS       T08725                                 
Name
(RefSeq) GTP-binding protein YPTM2-like
  KO
K07874  Ras-related protein Rab-1A
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zof04131]
    121985613
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zof04147]
    121985613
   04031 GTP-binding proteins [BR:zof04031]
    121985613
Membrane trafficking [BR:zof04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    121985613
 Autophagy
  Other autophagy associated proteins
    121985613
Exosome [BR:zof04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121985613
  Exosomal proteins of other body fluids (saliva and urine)
   121985613
  Exosomal proteins of colorectal cancer cells
   121985613
GTP-binding proteins [BR:zof04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    121985613
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase GTP_EFTU MMR_HSR1 Gtr1_RagA SRPRB AAA G-alpha FeoB_N LANC_like Dioxygenase_N AAA_29 YqxG_N AAA_22 AAA_16 AAA_5 ABC_tran Septin DUF6974
Other DBs
NCBI-GeneID: 121985613
NCBI-ProteinID: XP_042395116
LinkDB
Position
5B:119818663..119821608
AA seq 203 aa
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTVKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG
NKCDLLENKVVSYETAKAFADEIGIPFLETSAKNATNVEQAFMAMTAAIRSRMASQPAMN
SAKPPTVQIRGQPVDQKSSCCSS
NT seq 612 nt   +upstreamnt  +downstreamnt
atgaatcccgagtatgactacttgttcaaactcttgcttattggcgattcaggtgttgga
aaatcatgcctacttctaagattcgctgatgattcctacttggaaagttacattagcact
attggagttgattttaaaattcgcactgttgagcaggacgggaagactgttaaacttcaa
atttgggatactgctgggcaagagcgattcagaactattaccagcagctactaccgcggt
gctcatggtatcattgtggtctacgatgtcacagaccaagagagctttaataatgtaaag
cagtggttgaatgagattgatcgatacgcaagtgacaatgtgaataagcttctggttggg
aacaagtgtgatctgcttgaaaacaaagttgtttcatacgagacagccaaggcttttgct
gatgagattggtatccctttcttggaaactagtgcaaaaaatgctactaatgtggagcaa
gcattcatggccatgactgctgccatcaggagcaggatggcgagccaacccgccatgaac
agtgccaaaccaccaacagttcaaattcgtggacagcctgttgaccagaagagcagctgc
tgctcttcttga

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