Zingiber officinale (ginger): 121985679
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Entry
121985679 CDS
T08725
Name
(RefSeq) cullin-1-like isoform X1
KO
K03347
cullin 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04120
Ubiquitin mediated proteolysis
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121985679
04120 Ubiquitin mediated proteolysis
121985679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121985679
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
121985679
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
121985679
NCBI-ProteinID:
XP_042395247
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Position
1B:complement(107957440..107962841)
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AA seq
746 aa
AA seq
DB search
MKRKRAVRNKKRKPILFGEGWEVIEQGVTKMKRILEGLPEPPFTSEEYMKIYTTIHNMCI
QSSQHDYTEKLYIKYKEVIKEYITSVVLPSLKDKHDEFLLRELVIRWSNHKVMTKWLSRF
LSYLSRFFIKRNSLPSLDEVAFTSFRDQVYKKTKGKVKDAAISLIDQERCGEQIDRGLLK
NVIEIFVEIGMGKMDYYKNDFEEEMLKETTAYYSRKASNWILVESFPDYMLKVEECLRRE
KDRVVHYLHATSEPKLIEQVRHEVLCVYSSQLLENEKSGCCVLIQEHKVDELSRMYKLFS
KIDDSLCRISQIYKKHVTVEGTTLVKKADDVASNKEVTLLLACFQTFVREVIELHDKNMP
LVNDCFQNHTLFHKALKEAFEIFLNKTVAGSSTAELLVNYCDNILKKGGSEKHSDEAIEQ
ILEKAVNLLGYIYDKDLFVEFYRKKLARRLLFDKSANEDHERSILTKLKQQNGAHFTSKL
EGMVTDMILARETQADFKEYLQYNPHTNPGIDLSVTVLTTGFWPSYRSSDFHLPFEMTKC
IQAFKEFYPTKTNSRKLTWIYSLGTCNITAKFELQTIELIVTTYQAAVLLLFNDSDRLSY
SEIMSQLNLADDDIVRLLQSLCCLKYKILNKEPNTNSISSDDVFAFNSKFTNKMRRIRIP
LPIVDEKKKILEVVDKDRKYVVDACLIRIMKSRKVLNHQQLITECVEQLKVFKPDLKLIK
KRIEDLINREYLERDSENLNLYRYLT
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaaaagggcggtgcgtaataagaagcggaagccgatccttttcggcgaaggg
tgggaggtcatcgagcaaggcgtcaccaagatgaagaggatcttggaagggcttcccgaa
ccacctttcacatccgaggaatacatgaagatctacacaacaatccacaatatgtgtatc
caaagttctcagcacgattacacggaaaaattgtacataaagtacaaggaagtgatcaag
gagtacataacttccgtggtattgccctctttgaaggacaagcatgatgagtttttgtta
agggaactggtcataagatggtcaaatcataaagttatgaccaaatggctttcacgtttt
ctttcgtaccttagtcgctttttcatcaagcggaactcacttccatcacttgatgaagtt
gcatttacaagttttcgagaccaggtttataagaagactaaaggaaaagttaaagatgct
gccatttctttgattgatcaagagcgctgtggtgaacaaattgataggggtctgctgaag
aatgttattgaaatttttgttgaaattggaatgggcaagatggattattataaaaatgat
tttgaagaagaaatgcttaaagaaacaacagcctattactctagaaaagcttcaaattgg
attctcgtcgaatcattcccagattacatgttaaaggttgaggagtgcttaaggagggag
aaggatagggtcgttcattatttgcatgctaccagcgaaccaaaattgatagagcaagtg
cgtcatgaggttctatgtgtttattcaagccaacttttggaaaatgaaaagtctggttgc
tgtgtcttaattcaagaacacaaggtggatgaactttcacggatgtacaagcttttttca
aagatagacgacagcctatgtcgtatctctcaaatttataagaagcatgtgactgttgag
ggtacaactttagttaaaaaagcagatgatgttgcaagtaataaggaggtaactttactg
cttgcttgttttcagacttttgttagggaagttattgaacttcatgacaagaacatgcca
ctcgtgaatgattgtttccaaaatcatacccttttccataaggcactcaaagaggcattt
gagattttcctcaataagactgttgctggtagctcaactgctgagttactggttaactat
tgtgataatattcttaagaagggtggaagtgagaaacatagtgatgaagcaattgaacaa
atacttgaaaaggctgtgaatttgcttggttatatctatgacaaagatttatttgttgag
ttctataggaaaaaacttgctaggaggttgttattcgacaaaagtgctaatgaggaccat
gagagaagcatcttaacaaaactgaagcagcaaaatggtgcacattttacctcaaagttg
gagggaatggtaactgatatgatcctcgctagagaaacacaagctgattttaaggaatat
cttcaatataatccacatacaaatccagggatagatttatccgttactgttttgacaact
ggattctggccatcttatagatcatctgatttccaccttccttttgaaatgactaaatgt
atacaagctttcaaggagttctatccgacaaaaacaaacagcagaaagctcacatggata
tattctttggggacatgtaatattacagccaagttcgaattgcaaactatagagcttatt
gtaacaacatatcaggctgcagttcttctgctctttaatgactcagatcgattaagctac
tcggagatcatgtctcagcttaatttagccgatgatgatatagtcagattgcttcaatcc
ctttgttgcttgaagtataaaattctgaataaagaaccaaatacaaattctatttcttca
gatgacgtctttgcgttcaattcaaaattcaccaacaaaatgagaaggatcaggataccc
cttccaattgtggatgaaaaaaagaaaatacttgaagtggtggacaaggatagaaaatat
gttgttgatgcctgcctgattcgcattatgaaaagccgcaaagtattgaatcatcaacag
ttgattacagaatgtgtcgaacaacttaaagtgttcaagcctgacttgaaactaattaag
aagcgtattgaagatttgataaatagagaatatctagagagagactcggagaacctgaat
ctgtaccgataccttacttga
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