Zingiber officinale (ginger): 121985763
Help
Entry
121985763 CDS
T08725
Name
(RefSeq) vesicle transport v-SNARE 13-like
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121985763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121985763
Membrane trafficking [BR:
zof04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
121985763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
XhlA
Prominin
Motif
Other DBs
NCBI-GeneID:
121985763
NCBI-ProteinID:
XP_042395323
LinkDB
All DBs
Position
5B:complement(123925145..123935458)
Genome browser
AA seq
221 aa
AA seq
DB search
MSEVFEGYERQYCEISAALSQKLTSTALLSGEQKNQKVSEIKIGLDDAESLIRKMDLEAR
SLQPSVKAGLLVKLREYKLDLNNLKGGLKKITTVNSNQAAREELLESGMADTLAVSADQR
GRLALSTERLNQSTERINESRRTMLETEELGVSILQDLHQQRQSLLHAHGTLHGVDDNIG
KSRKILAAMIKRMDRNKWIVGCIITALVLAILLILYFKLTH
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagtttttgaaggctacgagcgccaatactgcgagatatcggcagctctctcg
cagaagttgacatctactgcacttctcagtggagaacaaaagaatcaaaaggtatcagaa
ataaaaattggtttggatgatgctgagtccctgattcgcaagatggaccttgaggcaaga
agtctgcagcctagcgtcaaagctggattattggtgaagctgagggaatacaagttggac
ctgaataatctgaaaggtgggcttaaaaagattacaactgtgaactctaatcaagcagca
agagaggagctgctggaatcaggaatggctgatacacttgcggtctctgctgatcaaaga
ggaagattggctttgtcaacagagagattgaatcaatctacagaaagaataaatgaaagc
agaagaacaatgttggaaacagaagaactcggtgtttcaattttgcaagacctacatcaa
caacgtcaatctctgttgcatgctcatggcacacttcacggcgtggatgataatatcggc
aagagtagaaagatcttggcagccatgataaaaagaatggaccgaaacaagtggatagtt
ggctgcatcattactgctctggttttggcaattctactaattctgtattttaagctcacc
cactaa
DBGET
integrated database retrieval system
