Zingiber officinale (ginger): 121985809
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Entry
121985809 CDS
T08725
Name
(RefSeq) cullin-1-like
KO
K03347
cullin 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04120
Ubiquitin mediated proteolysis
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121985809
04120 Ubiquitin mediated proteolysis
121985809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121985809
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
121985809
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
121985809
NCBI-ProteinID:
XP_042395442
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Position
1B:complement(107990017..107995412)
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AA seq
745 aa
AA seq
DB search
MKRKRAVPKPILFGEGWEVIEQGVTKMKRILEGLPEPPFTSEEYMKIYTRIHDMCIQRSP
HDTTEKLYTKYKEVIMEYITSVVLPSLKDKHDEFLLRELVIRWSNHKIMSKWLSRFFSYL
SRFFIKRNSLPSLDEVAFTCFRDQVYKETKGKVKDAAISLIDQERCGEQIDRGLLKNVIE
IFVEIGTGKMDYYKNDFEEEMLKETTAYYSRKASNWILIESFPDYMLKVEECLRREKDRV
VHYLHATSEPKLIEQVRHEVLCVYSSQLLENEKSGCCVLIQEHKVDDLSRMYKLFSKIDD
GLCRISQIYKKHVTVEGTTLVKKADDVASNKEAEKRVVVGLQEQTFVREVIELHDKNMPL
VNDCFQNHTLFRKVLKEAFEIFLNKTVAGSSTAELLVNYCDNILKKGGSEKHSDEAIEQI
LEKAVNLLGYIYDKDLFVEFYRKKLARRLLFDKSANEDHERSILTKLKQQNGTHFTSKLE
GMVTDMTLARETQADFKDYLQCNPRTNPGIDLSVTVLTTGFWPSYRSSDFHLPFEMTKCI
QAFTEFYPTKTNSRKLTWIYSLGTCNITAKFELQTIELIVTTYQAAVLLLFNDSNRLSYS
EIMSQLNLADDDVVRLLQSLCCLKYKILNKEPNTNSISSDDVFAFNSKFTNKMRRIRIPL
PIVDEKKKILEVVDKDRKYVVDACLIRIMKSRKVLNHQQLITECVEQLKVFKPDLKLIKK
RIEDLINREYLERDSENLNLYRYLA
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaaaagggcggtgccgaagccgatccttttcggcgaagggtgggaggtcatc
gagcaaggcgtcaccaagatgaagaggatcttggaagggcttcccgaaccacctttcaca
tccgaggaatacatgaagatctacacaagaatccacgatatgtgtatccaaaggtctccg
cacgataccacggagaaattgtacacaaagtacaaggaagtgatcatggagtacataact
tccgtggtattgccctctttgaaggacaagcatgatgagtttttgttaagggaactggtc
ataagatggtcaaatcataaaattatgagcaaatggctttcacgttttttttcgtacctt
agtcgctttttcatcaagcggaactcacttccatcacttgatgaagttgcatttacatgt
tttcgagaccaggtttataaggagactaaaggaaaagttaaagatgctgccatttctttg
attgatcaagagcgctgtggtgaacaaattgataggggtctgctgaagaatgttattgaa
atttttgttgaaattggaacgggcaagatggattattataaaaatgattttgaagaagaa
atgcttaaagaaacaacagcctattactctagaaaagcttcaaattggattcttatcgaa
tcattcccagattacatgttaaaggttgaggagtgcttaaggagggagaaggatagggtt
gttcattatttgcatgctactagcgaaccaaaattgatagagcaagtgcgtcatgaggtt
ctatgtgtttattcaagccaacttttggaaaatgaaaagtctggttgctgtgtcttaatt
caagaacacaaggtggatgatctctcacggatgtataagcttttttcaaagatagacgat
ggcctatgtcgtatctctcaaatttataagaagcatgtgactgttgagggtacaacttta
gttaaaaaagcagatgatgttgcaagtaataaggaggcagagaaaagggttgttgttggc
ttgcaagaacagacttttgttagggaagttattgaacttcatgacaagaacatgccactc
gtgaatgattgtttccaaaatcatactcttttccgtaaggtactcaaagaggcatttgag
atttttctcaataagactgttgctggtagctcaactgctgagttactggttaactattgt
gataatattcttaagaagggtggaagtgagaaacatagtgatgaagcaattgaacaaata
cttgaaaaggctgtgaatttgcttggttatatctatgacaaagatttatttgttgagttc
tataggaaaaagcttgctaggaggttgttattcgacaaaagtgccaatgaggaccatgag
agaagcatcttaacaaaactaaagcaacaaaatggtacacattttacctcaaagttggag
ggaatggtaactgatatgaccctcgctagagaaacacaagctgattttaaggattatctt
caatgtaatccacgtacaaatccagggatagatttatcagttactgttttgacaactgga
ttttggccatcttatagatcatctgatttccaccttccatttgaaatgactaaatgtata
caagctttcacggagttctatccgacaaaaacaaatagcagaaagctcacatggatatat
tctttggggacatgcaatattacagccaagtttgaattgcaaactatagagcttattgtg
acaacatatcaggctgcagttcttttgctctttaatgactcaaatcgattaagctactcg
gagatcatgtctcagcttaatttagccgatgacgatgtagtcagattgcttcaatccctt
tgttgcttgaagtataaaattctgaataaagaaccaaatacaaattctatttcttcagat
gacgtctttgcgttcaattcaaaattcaccaacaaaatgagaaggatcaggatacccctt
ccaattgtggatgaaaaaaagaaaatacttgaagtcgtggacaaggatagaaaatatgtt
gttgatgcatgcctgattcgcattatgaaaagtcgcaaagtattgaatcatcaacagttg
attacagaatgtgtcgaacaacttaaagtgttcaagcctgacttgaaactaattaagaag
cgtattgaagatttgataaatagagaatatctagagagagactcggagaatctgaatctg
tacagatacctggcttga
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