Zingiber officinale (ginger): 121985826
Help
Entry
121985826 CDS
T08725
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121985826
Membrane trafficking [BR:
zof04131
]
Autophagy
Other autophagy associated proteins
Others
121985826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
BCAS3_WD40
Beta-prop_Vps41
WDR55
Beta-prop_HPS5
DUF7099
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
CPSF_A
Beta-prop_TEP1_2nd
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
121985826
NCBI-ProteinID:
XP_042395430
LinkDB
All DBs
Position
5B:125562306..125566041
Genome browser
AA seq
463 aa
AA seq
DB search
MASVSIPPPSPIASDASASTSDPATGPGSSSPAPPPVDYPNPFSPPHLDPEEEEEEEEAN
IGDPPKLDESFEDVASQPTSDSSLDASSTTPTLQPVPATTSSSPPRVAENDAALALSLLH
LSFNQDHGCFAVGTDRGFRIYNCDPFREIFRRDFDGRGIGVVEMLFRCNILALVGGGPNP
NYPPNKVMIWDDHQSRCIGELSFRSEVRAVRLRRDKIIVVLDNKIFVYNFADLKLIHQIE
TVPNPKGLCAVSQQQGSLVLVCPGGQKGQVRVEHYGSRRTKFIMAHDSRIACFALSQDGR
LIATASSKGTLVRIFSTVDGTLLQEVRRGADRAEIYSLAFSSDMQWLAVSSDKGTVHVFS
LKVNLGLTANDKPRPASDPNSPTQSSHLSFMKGVLPKYFHSEWSVAQFRLHENTHYIVAF
GHQKNTVIILGMDGSFFRCQFDPAAGGEMKQLVCYNFLKSESF
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgtctcgatccctcctccttcgcccatcgcctcagatgcttccgcttcgact
tcggatcccgcgaccggtcccggctcgtcttcgcccgcccctccgccggtggactaccct
aaccccttctcgcccccgcatctcgatcccgaggaggaggaggaggaggaggaagcgaac
atcggcgatcctccgaaactagatgaatctttcgaggatgtggcctcccagccgacctcg
gattcctccctcgacgcctcctccacgactcccacgctgcagccagtccccgcgaccacg
tcctcctctccgcctagggtagcggaaaacgacgccgcgctggcgctgtcgcttctccac
ctgtcttttaaccaggaccacggttgcttcgccgtcggcacagataggggattccggatc
tacaactgtgaccctttccgagagatcttccgccgggactttgatggaaggggcatcggc
gtggtggagatgctgtttcggtgcaacatcctcgctctcgttggcggcgggccgaacccg
aactacccgcccaataaggtcatgatctgggatgatcaccagagccggtgcatcggggag
ctctccttccgttcggaggtccgtgccgtccggctccggagggacaaaattattgtggtt
cttgacaacaagatattcgtctataatttcgcggaccttaagttgatccatcagatagag
actgtgccgaatcccaaggggttgtgtgctgtttcacagcaacaggggtcgcttgtgctt
gtctgcccaggtggtcagaaggggcaggtcagggtggagcattatggatcgaggcgaacg
aagttcattatggcacacgattcaaggatagcttgttttgctctgtcgcaggatggaagg
ttgattgcaactgcaagttccaagggcacgcttgttaggatattcagcacagtcgatggt
actctccttcaagaagtaagaagaggtgctgatagagcagagatatatagtttggctttc
tcttctgacatgcagtggttggctgtctctagtgacaagggaactgttcatgttttcagc
ctcaaggttaatcttggattgacagcaaatgacaaacctcgccctgcatcagatccaaat
tctccaactcaaagttcacatctttcttttatgaaaggagtattgccgaaatactttcac
tcggaatggtcagtggcacagttccgattgcatgaaaatacacattacattgtcgcattt
ggccaccaaaagaacactgttatcattcttggtatggatggaagtttctttcgatgccaa
ttcgatccagctgcaggcggagaaatgaaacaattggtatgctataacttcctcaagtca
gaatccttctag
DBGET
integrated database retrieval system
