Zingiber officinale (ginger): 121986026
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Entry
121986026 CDS
T08725
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
121986026
Transcription factors [BR:
zof03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121986026
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-met
Motif
Other DBs
NCBI-GeneID:
121986026
NCBI-ProteinID:
XP_042395718
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Position
5B:130789443..130792264
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AA seq
467 aa
AA seq
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MAAASSSVPCFGIRGEDELSEQQSSAAAASAPAAPKKKRNQAGNPNPDAEVIALSPKTLL
ATNRFVCEVCGKGFQREQNLQLHRRGHNLPWKLKQRNPKEARRRVYLCPEPSCAHHDPSR
ALGDLTGIKKHYCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTPFSRRD
SFITHRAFCDALAQETARLPHSISAVGAAGGGGSGGNFYGNGVGAGGINLDLVPPENPQF
GHLSTATGSSLFRPTQSYHAGAGFGHDLNSLIQDMQSNINSSPGSLYNLSFFSNNAAAGG
AGGAHHLLLPSDQFHNSRSAGSLFPGISMSNDDASPFLAAGPTEPAAAALTPQMSATALL
QKASQMGAATQNSRGSLLAGAAYHSDTSRAQPVDTGRTFQTLMDSLSGGVYGNNNANVVD
DAAKLHHAAGRGTPAADNGLTRDFLGVANLCVLESEMKSAFSRRSNP
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcttcttcgtcggttccttgctttggaattagaggcgaagacgagctcagc
gagcaacagtcgtcggccgccgctgcttctgcaccagctgctcctaagaagaagcgaaat
caggctggaaatccgaatccggacgcggaggtgatcgctctgtcgccgaagacgctcctg
gcgacgaaccggttcgtctgcgaggtgtgcggcaaggggttccagcgggagcagaacctg
cagctgcaccggcgggggcacaacctgccgtggaagctgaagcagaggaacccgaaggag
gcgcggcggcgggtctacctctgccccgagccctcctgcgcgcaccacgacccctcccgc
gccctcggcgacctcaccggcatcaagaagcactactgccgcaagcacggcgagaagaag
tggaagtgcgacaagtgctccaagaagtacgccgtccagtccgactggaaggcccactcc
aagacctgcggcacccgcgagtaccgttgcgactgcggcactcccttttccaggcgcgat
agcttcatcacgcacagagccttctgtgacgcgctggctcaggagacggcgaggctcccc
cacagcatttccgccgttggagcagctggcggtggaggaagcggcggaaacttttatggc
aacggtgtcggcgccggcgggatcaatttggaccttgttcctccggagaatccacagttc
ggccacttgagcactgcgactggctcttccttgttccggccgacgcaatcctaccatgcc
ggcgctggattcggccacgacttaaatagcttgatccaagacatgcagagcaacataaat
tcctcgccgggaagtctttacaacctcagtttcttctccaacaacgccgcagccggtggt
gccggcggcgcccatcacttactgctcccttccgatcaattccacaattcaaggtccgcc
ggcagtcttttccccggcatcagcatgagcaacgacgacgcctctccttttctcgcggcc
ggccccaccgagcccgcggccgcagcgctgacgccgcagatgtccgccaccgcgctgctt
cagaaggcctcgcagatgggcgccgcgacgcagaacagccgcggctccttgctcgccggc
gccgcttaccactcagacacctcgagagcgcaaccggtggacaccggcaggacctttcaa
accctaatggattccctaagcggcggtgtatacggcaacaacaacgctaacgtggtagac
gatgccgccaagttgcaccacgccgccggcaggggcacgccggctgccgacaacgggctg
acgagggacttccttggcgtcgccaatttatgcgtgttggagtcggagatgaagtcggct
ttttccaggaggagcaacccgtga
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