Zingiber officinale (ginger): 121986199
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Entry
121986199 CDS
T08725
Name
(RefSeq) tyrosine--tRNA ligase, chloroplastic/mitochondrial-like
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121986199
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
121986199
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
121986199
03029 Mitochondrial biogenesis [BR:
zof03029
]
121986199
Enzymes [BR:
zof01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
121986199
Amino acid related enzymes [BR:
zof01007
]
Aminoacyl-tRNA synthetase
Class I (A)
121986199
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121986199
Prokaryotic type
121986199
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
121986199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
SYY_C-terminal
S4
TyrRSs_C
Motif
Other DBs
NCBI-GeneID:
121986199
NCBI-ProteinID:
XP_042395987
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All DBs
Position
5B:complement(135982412..135984121)
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AA seq
516 aa
AA seq
DB search
MAAAAAALTASRASLLHLLRLKPLRPSVPLPNLSFRRRGVPLLRRCSSQSSPQTIAAPNL
DLDPSDRSCATRNVVEILQERGLVESITSESLRSACSNAAASPLKVYCGFDPTAESLHLG
NLLGIIVLSWFQRCGHKAVALIGGATGRVGDPSGKSLERPELDLDTLERNTAGIKDLISK
ILGRKLGNEDISDDLEAKPHKGLIFDDSFVILNNYDWWKDIKLLDFLREVGRFARVGIMM
AKESVKRRLTSDEGMSYTEFTYQLLQGYDYLHLFKNMGVNVQIGGSDQWGNITAGTELIR
KILQVEGAYGLTFPLLLKSDGTKFGKSEDGAIWLSAAMLSPYKFYQYFFSIPDIDVVKFL
KILTFLSMEEIEELEDQMKKPGYVPNTAQRRLAEEVTRFVHGDGGLTEALKATEALRPGA
ETQLDAATIEGIAEDVPSCSLSYEQVLNSSLIDLSVSTGLLASKSAARRLMRQGGLYLNN
KRVDTEEKRVEGIDIVDGKLLLLSAGRKNKMVVRIS
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgccgccgccctaacggcttctcgcgcttccctcctccacctcctccga
ttaaagccccttcggccatccgtgccgctgcccaacttatccttccgccgccgcggcgtt
cctcttctccgtcgatgctcctctcaatcgtcccctcaaaccatcgcggcgccgaacctg
gacttggatccctccgaccgttcctgtgccactcgtaacgtcgtcgaaatcctccaggag
cggggcctcgtggaatccatcaccagcgagagtctcagatccgcgtgctccaacgccgcc
gccagtcccctcaaggtctactgcggcttcgatccgaccgctgaaagcttgcacctcggg
aacctcctagggatcattgtcctttcctggttccagcgctgcggccacaaggctgttgcc
ctgatcggtggcgccactggccgcgtgggagatccgtctggaaaaagcttagagcggccg
gagctcgatctagacaccttggagaggaatactgccggcatcaaggatttaatctctaaa
atcctaggaagaaagctagggaacgaggatattagcgacgacctggaagcgaaacctcac
aaaggtttgatctttgatgattcttttgtgattctgaacaattacgactggtggaaggac
atcaaattgttagacttcctgagagaggtaggaagatttgctagggttggtataatgatg
gccaaggagagcgtgaagagaaggttaacctcagatgaaggaatgagctacactgagttc
acttatcagctgttgcagggttatgactatctacatttgttcaaaaacatgggtgtcaat
gttcagattggcggtagcgatcagtggggcaacatcactgctggcaccgaactgattcga
aagatattgcaggttgagggggcttatggtttgaccttccctctcttgctcaagagtgat
ggtaccaagtttgggaaatccgaagacggggctatatggttgtcggcggcaatgttgtct
ccctacaagttctatcaatacttcttctcgataccggacattgatgtcgtaaagttcttg
aagatccttacctttttgagtatggaagagattgaagaactagaggatcaaatgaagaag
cccggttatgttcctaatacagctcagaggaggcttgcggaagaggttacgcgcttcgtg
cacggggatgggggactcaccgaagctttgaaggcaaccgaagctttgagacctggagct
gagacacagttggatgctgcaacaatcgaaggaatcgcggaggatgtgccatcttgttct
ttgtcatatgagcaagtgctgaactcttctttgattgatctctcagtgtccactggtttg
ctagctagcaagtctgccgcaagacggctgatgaggcaaggaggcctctatttgaataac
aaaagggtcgataccgaggaaaagagggtggaaggaatcgacattgttgatggcaaactg
ctcttgttatctgctggaaggaagaataagatggttgtgagaatatcctga
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