Zingiber officinale (ginger): 121986200
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Entry
121986200 CDS
T08725
Name
(RefSeq) lariat debranching enzyme-like
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
121986200
03009 Ribosome biogenesis [BR:
zof03009
]
121986200
Spliceosome [BR:
zof03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121986200
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
90S particles
RNase
121986200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_3
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
121986200
NCBI-ProteinID:
XP_042395988
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Position
5B:136012611..136019423
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AA seq
420 aa
AA seq
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MKIAVEGCLHGELDKVYATIQHIEQVENTKIDLLLCCGDFQAVRNENDLESLSCPPKYRS
MNSFWKYYSGQAVAPVPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGYSGVIKFGNIRI
GGLSGIYKSGHYHLGHFERPPYTDRDLRSVYHIREYDVMKLKQIKDPIDVFMSHDWPVGI
YEYGNSKRLVQHKPFFKEEIEKRTLGSMPAAELLSQLKPQYWFSAHLHCKFSAVVKHKED
DSITKFLALDKCLPGRSFLQIIDINSNSGPHEIHYDDEWLAITRKFNSVFPLSRKSIRFR
SEQYDKQIYCEWVRNKLNARGARPFDFVQTVAPFHPSQPFNNRSTTGHCRNPQTESLLEF
LELPYLLDTAVETNTPTQNKNTVDSRDSWNQYQDDGKSAGDENIIELDEVEDEDEDDEDV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagcggtggaaggatgcttgcacggggagttggataaggtttacgccacgatt
cagcatatcgagcaggtggagaacacgaagattgaccttcttctttgttgcggcgacttt
caggcagtcagaaatgaaaatgatcttgaaagcttaagttgcccaccgaagtatcgaagt
atgaattcattttggaagtattattctgggcaagcagtagctccagtcccaactatattc
attggtgggaaccatgaagcatcaaattacttatgggaattatattatggtggatgggct
gcacctaatatttatttcttgggctactctggtgtaatcaagtttggcaacataagaatc
ggtggactctctgggatttataagtctggacattatcatctaggacattttgagagacct
ccatatactgatagggatcttcggtctgtgtatcatattcgtgaatatgatgtaatgaag
ctcaagcaaattaaggacccaatagatgttttcatgtcgcatgattggcctgttggtatt
tatgaatatggaaactcaaagcgtcttgttcaacacaaaccattttttaaagaagagatc
gagaagagaactcttggtagtatgcctgctgcagagctgctgagccaactgaagcctcag
tattggttttcagctcatcttcactgcaaattttcagctgttgttaagcacaaggaggat
gattctataacaaagttcctagcccttgacaaatgccttccaggtcggagttttttacag
attattgatatcaactctaactcaggacctcatgaaattcactatgatgatgaatggctg
gcgataacaagaaaatttaatagtgtctttccattgagcagaaaatctattcgctttagg
tctgaacagtatgacaaacaaatctattgtgagtgggtgagaaataaactaaatgccaga
ggagccagaccatttgattttgtgcagactgttgcaccttttcacccttctcagccattc
aacaacagatcaactacaggacattgtcggaacccccagacagagtcattgttggagttt
ttagagctcccttatcttcttgatactgctgtagagaccaatacaccaactcaaaataaa
aatactgttgattctagagattcttggaatcaatatcaggacgatggtaaatctgctgga
gatgagaatattattgagctcgatgaagttgaagatgaagatgaagatgacgaagatgta
tga
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