Zingiber officinale (ginger): 121986212
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Entry
121986212 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase DIS1-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121986212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121986212
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121986212
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
121986212
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
121986212
NCBI-ProteinID:
XP_042396007
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Position
5B:136111199..136114492
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AA seq
319 aa
AA seq
DB search
MTNFKLGKKQTFASSSCDVQPTSMMEPPSSPMNLNSVKPKEQVQPQSAVNLPHGKSSFIL
PNSDIDELLECPVCKNAMFPPIQQCPSGHTLCFSCKNKVNNKCPICRKEIGHIRCLALEK
LAASLHLCCSYHCLGCKEMLPYYSKLQHETQCIYRPYTCPHPGSDCPFTGDIRELLSHLR
QCHKLDLQVGSTFHHRYVKQDPRSVDNCSWTLTLFNCFDRYFCLHFEAFVLGCEPVYMAF
IRFLGEESEARKFNYCLEVGGHGRKMKWQGVPRSIRTHHRVVRDSHDGLLLHRNLAIYFS
GGDQKVLKLRVSGRIWKET
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaccaattttaagctaggaaagaagcaaacctttgcgagctcatcctgtgacgttcag
cctacaagtatgatggagccaccttcttcacctatgaatcttaattctgtcaagccaaag
gaacaagttcaacctcagtctgcagtgaatttaccacatgggaaatcatcctttatactt
ccaaatagtgacatcgatgaattattggagtgccctgtctgcaagaatgcaatgtttcct
cctatccagcagtgtccaagtgggcacactttgtgtttttcttgcaaaaacaaagtcaac
aacaagtgcccaatctgccgaaaggaaatcggtcacatccgttgtttagcactggaaaaa
cttgccgcttcactccacttatgttgttcataccactgcctcggctgcaaagaaatgctt
ccctattacagcaagttgcaacacgaaacacagtgcatttaccggccttacacatgcccc
catcctggttcagattgtcccttcaccggagacattcgcgaacttctgtcgcatctgaga
caatgccacaagttggatcttcaagtaggaagcactttccatcaccgttatgtgaaacag
gatcctcgttctgtcgacaattgctcatggactctaactttattcaactgctttgaccgt
tacttctgcctgcacttcgaggcatttgtgctgggatgtgagccggtttatatggccttc
atccgtttcctaggggaagagtccgaagctagaaaattcaactattgccttgaagtagga
ggtcatggacgcaagatgaagtggcagggtgtgcctcgaagcatcaggactcaccacagg
gtggtccgagacagccacgatgggctcctgcttcaccggaacttggccatctatttctct
ggtggtgatcaaaaggtgctgaagctgcgagtctccggcaggatctggaaggagacgtga
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