Zingiber officinale (ginger): 121986305
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Entry
121986305 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121986305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121986305
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121986305
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
121986305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
121986305
NCBI-ProteinID:
XP_042396119
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Position
5B:complement(137936883..137940297)
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AA seq
296 aa
AA seq
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MDIPESHVIECELSDFDNGCVPSYKSSATSGVKAGVSTAGSVHELLECPVCTNSMYPPIH
QCPNGHTLCSSCKARVHNHCPTCRQELGNIRCLALEKVAESLELPCRYQSPGCPEIHPYY
NKLKHEQQCRFRPYNCPYAGSECLVTGDIVMLVTHLKNDHKVDMHNGCTFNHRYVKSNPH
EVENATWMLTVFSCYGHYFCLHFEAFLLGMTPVYMAFLRFLGEDSEARQFSYSLEVGGND
RKLTWQGVPRSIRDSHRKVRDSYDGLIIHRNMALFFTGGSRQELKLRVTGRIWKEQ
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggatatccctgaatctcatgtaatagagtgcgagctctccgatttcgataatggttgt
gtgccatcttacaagtcttctgctacttctggtgtcaaagcgggtgtatctacagctggt
agtgtgcacgagcttcttgaatgcccagtgtgtacaaattccatgtaccctcccatacat
cagtgccccaatggccatactctatgttcaagctgcaaagcgagagtgcacaatcattgc
cctacttgtcggcaagagttggggaacatcagatgcctggcccttgagaaagttgccgag
tcattggagttaccatgccgataccaaagccccggctgcccagagatacatccatattat
aacaaactgaaacatgaacagcaatgcaggttcagaccttacaattgtccctatgccggt
tcagaatgcctggtcactggtgacattgtaatgctcgtcacccacttgaaaaatgatcat
aaggtggatatgcacaacggatgcacatttaatcatcgttacgtcaaatctaacccccac
gaagtggaaaatgcgacatggatgctcactgttttcagttgctatggccattatttctgc
cttcactttgaggcattccttctcggaatgactcctgtgtacatggcattcttaaggttt
ctcggcgaagacagtgaggcaaggcagttcagctacagcttggaagttggcggcaatgac
cgaaaacttacatggcagggagtaccaaggagcatcagggatagtcacaggaaagtgcgt
gacagctatgatgggctgatcatccatcggaacatggctctcttcttcaccggtggtagc
cggcaagagctgaagctacgagtgactggccgtatttggaaagaacaataa
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