Zingiber officinale (ginger): 121986350
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Entry
121986350 CDS
T08725
Name
(RefSeq) syntaxin-124-like
KO
K08486
syntaxin 1B/2/3
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121986350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121986350
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
121986350
Membrane trafficking [BR:
zof04131
]
SNARE
Syntaxin (Qa)
Stx-PM
121986350
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
121986350
Exosomal proteins of other body fluids (saliva and urine)
121986350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
KASH_CCD
Syntaxin-6_N
Helo_like_N
Motif
Other DBs
NCBI-GeneID:
121986350
NCBI-ProteinID:
XP_042396171
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All DBs
Position
5B:complement(138722136..138723056)
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AA seq
306 aa
AA seq
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MNDLLSTTSFKNYTNLRQQVQMDQMEAGMADGEAAGANLGSFFEEVEGVKKDLRGLEGLF
RRLQEANEESKTAHSAKAMKEVRARMDADTGQVLRAAKGVKVKLEALEKSNAQHRLVPGC
GPGSSADRTRTSVVCGLGSKLKDLMDSFQGLRARIAAEYKETVGRRYFTVTGQQADEETV
ENLISSGASETFLQKAIQEQGRGQVMDTISEIQERHDAVKDIERSLLDLHQVFLDMAALV
EAQGHQLNDIESHVAHASSFVRRGTVELETAREYQQSSRKWVCIGILAAAVLITILLLPL
LTTLLR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatctgctgtcgacgacatcgttcaagaactacacgaacctgcgacagcaggtg
cagatggaccagatggaggcgggcatggcggacggcgaggcggccggcgccaacctcggc
tccttcttcgaggaggtggagggagtcaagaaggacctgcgggggctcgaggggctcttc
cggcgcctgcaggaggccaacgaggagagcaagacggcgcacagcgccaaggccatgaaa
gaggtgcgggcgcgaatggacgccgacaccgggcaggtgctccgcgccgccaagggggtg
aaggtcaagctggaggcgctggagaagtcgaacgcgcagcaccggctggttcccggctgc
gggccggggtcctccgccgaccggacgaggacgtcggtggtctgcgggctgggctccaag
ctgaaggacctgatggacagcttccagggcctgcgcgcccgcatcgccgccgagtacaag
gagacggtgggccggcggtacttcaccgtgacggggcagcaggccgacgaggagacggtg
gagaacctgatctcctccggcgcgagcgagacgttcctgcagaaggcgatccaggagcag
gggcgcgggcaggtgatggacaccatctcggagatccaggagcggcacgacgccgtgaag
gacatcgagcgcagcctgctcgacctgcaccaggtcttcctcgacatggcggcgctggtg
gaggcgcagggccaccagctcaacgacatcgagagccacgtcgcccacgccagctccttc
gtgcggcggggcacggtggagctcgagacggcgagggagtaccagcagagctcccgtaaa
tgggtctgcatcggcatactcgccgccgccgtcctcatcaccatcctcttgctccctctt
ctcaccaccctgcttaggtag
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