Zingiber officinale (ginger): 121986381
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Entry
121986381 CDS
T08725
Name
(RefSeq) PHAF1 protein At3g51130-like
KO
K27411
phagosome assembly factor 1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121986381
Membrane trafficking [BR:
zof04131
]
Autophagy
Other autophagy associated proteins
Others
121986381
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHAF1
Motif
Other DBs
NCBI-GeneID:
121986381
NCBI-ProteinID:
XP_042396224
LinkDB
All DBs
Position
5B:complement(139429881..139436860)
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AA seq
415 aa
AA seq
DB search
MQHLQHQPRSGASAAPRRRCEGTAMGAITLDLRPGLGIGPFTLGMPLHEAIAQLELQRNI
YDDIYAKYCDEEPLSMDIVISFPDHGFHIRFDPWSQRLRLIEVYDVKRLQMRYAMSLIGG
PSTLATFVAVYTLFGPTFPGTYDKDRGTYTLFYPGLSFAFPIPSQYAYCCQNAEVSTELP
LEFPDGTTPVACRVCIYDGSSDSKVGVGSLLDQAIVPPLPAGSLYMEEVHAKLGEELWFT
VGGQHIPFGASPQDIWTELGPPCGIYQKQVDQMVIHSASDPRPRTTLCGDYFYNYFSRGL
DILFDGQTHRIKKFVLHTNFPGHSDFDSYMKCNFVIYDSDVEGTIQIGKMTKNCITSSTK
WEQIKEILGDSGPAAIQTQGSMNSPFGSTFVYGYPNVAFEIMKNGHIATVTLFRS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatctgcagcaccaaccgagatcgggagcgtcggcggctcctaggcggaggtgc
gagggcacggccatgggcgccatcacccttgaccttcgcccgggccttggcatcgggccc
tttacccttggcatgcctttgcatgaagcaattgcccagctggaacttcaacgtaatatt
tatgatgacatctatgcgaagtattgtgatgaggaacccctgagcatggacattgtcatt
agctttcctgatcatggttttcatattcgttttgatccttggtcacagaggctacgtctt
attgaagtgtatgatgtcaaacggttgcaaatgcgatatgcgatgtctctgattggtggc
ccttctacactcgctactttcgtagcagtatatacactttttggacctacatttcctgga
acttatgacaaagatagagggacatacaccttattttacccaggattgtcctttgctttt
cctatccctagccaatatgcatattgctgccagaatgcagaagtttcaactgagttgcct
cttgaatttcctgatggaacaactccagtagcatgccgggtttgcatatatgatggttct
tcagatagtaaggttggtgtaggatcacttttagaccaagctatagtccctccattgcct
gctggcagtctatacatggaagaagtgcacgctaagcttggagaggaattatggttcact
gttggaggtcagcatattccttttggtgcatcaccacaggatatctggactgagcttgga
cctccttgtggaatctatcagaagcaggtcgatcagatggtgattcactcagcttctgat
cctcgtccaaggaccactctttgcggtgattacttctacaattacttctctcgtggtctg
gacatattatttgatggacagactcacagaatcaagaagtttgttttgcatacaaatttc
cctgggcattctgactttgattcttatatgaaatgcaactttgttatctatgattctgat
gttgaaggtacaattcaaattggaaagatgactaaaaactgtattacatctagtacaaag
tgggaacaaataaaggagattctcggagatagtggtccggccgcaatccagactcagggt
tcaatgaacagcccatttggatcaacttttgtctatggatacccaaatgttgcttttgag
atcatgaagaacgggcatatagctactgttactcttttcagatcttaa
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