Zingiber officinale (ginger): 121986388
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Entry
121986388 CDS
T08725
Name
(RefSeq) ABC transporter G family member 45-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121986388
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
121986388
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
121986388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
SMC_N
AAA_29
AAA_16
AAA_18
AAA_22
ABC_trans_N
AAA_30
AAA
AAA_23
AAA_33
DO-GTPase1
TsaE
T2SSE
AAA_25
AAA_17
NACHT
RsgA_GTPase
VapE-like_dom
Zeta_toxin
AAA_19
NTPase_1
Pox_A32
FtsK_SpoIIIE
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
121986388
NCBI-ProteinID:
XP_042396237
LinkDB
All DBs
Position
5B:complement(139617692..139633734)
Genome browser
AA seq
1343 aa
AA seq
DB search
MEKVEGFSITCEEHEELISSLRDWRTRSGINAPKIEVRFEDLSVETEVHASRRVLPTLPN
AIINTVQELLGRLKVYNTNTSHVKVLSELKGIIKPSSYFRMTLVLGSPGSGKTTFLRALS
GKLDPSLKVTGKVTYNGQKMNHYLSQRMCAYVSQLDAHQAEMTVKETMEFSRKILNAGDD
IEMLKEVSTVKTEASIKEETNTNTTETVFSKDEGSFIVDHILKVLGLHECANIIIGDQMR
RGISGGQKKRVTIGEMLVGLAQCFFMDDISTGLDSSTTFQILKFLQQLTRALDFTMVISL
LQPAQEAFELFDDIILLCEGQIAYQGPREHVLKHFEWMGFKCPDRKNAADFLQEIISKRD
QSQYWTGSKSTYQYISIQKISECFRSSRIGLKLHKELQKPYNIEESDQIVKLNEMYIVRK
WEIFKACFSREKLLMKRNSLVHIFKAMQIIILAFVTMTIFLQTTMKHHTVTDGYHYLGAI
FGGVVMVKFNGMTELQIIMRRLPIYYKQREVLFLPGWAFLSPIIILSLLSSFIEAGLWTS
LTYYVIGFAPSAIRFLQQFLAFFCVHQMSTSLFRFIAIVARTQLMANILGTATLVAVYIF
GGFVISTDAIQSWLIWGCWLSPLTYSLNAIAINEFLDQRWNVKVDNGGSGEDTIGKIILR
LRGMLTEWHWYWFSVAILLAFSVVFNILSIVALKYMRAPLRNRSIIHMMPTDFKKVNADA
QALTAQVASQSRMSLPFQPLTIAFKNISYYVDMPKQLKQTGLKQERLQLLRQVSGVVRPG
VLTALMGVTGAGKTTLLDVLAGRKTVGHVEGSIKISGYPKRQETFTRISGYCEQSDTQSP
CLTVLESLWYSARLRLPSDIDKYSRRIFVDEVMELVELKKLKNAMVGLPGLNGLAAEERK
RLTIAVELVSSPSIIFMDEPTTGLDAQAAAIVMRTVRKAADTGRTIVCTIHQPSIEIFEA
FDELLLMKKGGQLIYSGPLGILSGNMRQYFEAIPGVPMIIDGQNPATWMLDVTSPAMEYK
LGIDFGTIYHNSSFYKDNIKLVDEFSERQTNTEDIHFISKYTQSFSSQCIWCLWKQHRSY
WKNPEHNVVRFIITVSISLLFGLVFFGIGSKRGTQQDILNVLGAMYGSALFLGFANASVV
QPIVERERIVFYRERAAGMYSSMPYAIAQVAIEIPYILIQVLIFSAIVYPMIGFPFTVAK
FFWFILFLVLSFVYFSLFGMMTVALTPNLEIAALLSFFIFVMWNIFSGFFIPRKMIPIWW
RWYYWADPAAWTIYGLMVTQVGNSDDPLHIVGSFDMTVKEFLEQYLGVQESYLPLIVSLH
FAIIVLFLFVFAFSIKYLNFQRR
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagtagaaggtttttcgattacctgtgaagagcatgaagagctgatctccagc
ttacgagattggagaacaaggtcgggaatcaacgctccgaagatcgaagtgcggttcgag
gatttgtcagtggagactgaggttcatgcttccaggagagttcttcccaccctacccaat
gccatcatcaacactgttcaggagctcctgggacggcttaaagtgtacaatacaaataca
agtcatgtcaaagttcttagtgaattgaaaggaattataaaaccatctagctatttcagg
atgacacttgtgctaggatctccaggatcaggaaagacaacatttttgagagcactttct
ggaaaactagatcctagtttaaaagtcacaggaaaagtaacatacaatggacaaaagatg
aaccactacctctcacaaagaatgtgtgcatatgttagccaacttgacgcccatcaagct
gagatgacagtgaaggagaccatggagttctctagaaaaatattaaatgccggagatgat
attgagatgcttaaagaagtgagcacagtaaaaacagaagcaagcatcaaagaagagaca
aataccaataccacggaaactgtgttttcgaaagatgaagggagtttcatagttgaccac
attctgaaggtacttggcttacatgagtgtgcaaacataataataggtgatcagatgaga
aggggaatatctggaggacaaaagaaaagagtcactattggtgaaatgctagtgggccta
gcacaatgttttttcatggacgacatttcaacagggcttgatagctccactacctttcag
attctcaagtttctgcagcagcttacacgtgctttggatttcaccatggttatatctttg
cttcagcctgctcaagaagcatttgagctatttgatgacatcatccttttatgtgagggg
caaattgcttatcaaggacccagagaacatgttcttaaacattttgaatggatgggcttc
aaatgtcctgatagaaagaacgcagcagatttcctgcaagagataatatcaaagagggat
caatcacaatactggacaggtagcaaaagcacatatcagtacatatctatacaaaaaatt
tcagaatgcttcagatcttctagaattggcctgaaactccacaaagagttgcaaaagcca
tataacatcgaggagagtgatcaaattgtcaaattaaatgagatgtatattgtccgaaag
tgggagatattcaaggcctgcttctcaagggaaaagctattaatgaagaggaactctctg
gttcacatattcaaggccatgcaaattataatactggcattcgttactatgacaattttc
ctccaaacaacaatgaaacatcacacggtaactgatggttaccattatctgggagccata
tttggtggagtagtgatggtaaaattcaatggtatgacagagttgcaaattattatgaga
agacttccaatctattacaagcagagggaagtgctatttctgccaggatgggctttcctt
tcacctattataatcctcagcctcctatcctcatttattgaagcaggtctatggacaagt
ctaacatactatgtgattggctttgcaccatcagcaattagattcttgcaacagttcttg
gcattcttttgtgtgcatcagatgtcaacgtcactttttcgctttatagctattgtcgca
agaacacaactgatggctaacatactagggacagccactctagtggctgtctacattttt
ggaggtttcgtcatatccacagatgctatccaatcatggttgatttggggctgctggtta
tctcctttgacatatagtctgaatgccatagcaatcaacgaatttcttgatcaaagatgg
aatgtgaaagttgacaatggaggaagtggcgaggatacaattggaaagatcatcctgaga
ttaagagggatgttaacagagtggcactggtactggttctctgtagcaatactgcttgca
ttttctgtggtcttcaatattctcagcattgtggcacttaaatatatgagagctccattg
agaaatagatcgatcatacatatgatgcctactgatttcaagaaggtcaatgcagacgcc
caagcattaacagctcaagtggcatcccaaagtaggatgtctctaccatttcagcctctg
acaatagcattcaaaaatattagttattatgtagacatgcctaagcaactgaagcaaact
ggattgaagcaggaaagacttcagttgctacgacaagtctctggagtcgtcaggcccgga
gtactaactgcactaatgggagtgacaggtgctggaaagactaccttactagacgttttg
gcaggaagaaaaacagtaggacacgttgaaggaagcatcaaaatatcaggatatccaaag
aggcaggagacatttaccaggatttcaggatattgtgagcaatcagatactcagtctcct
tgtctaacagttttagaatccttatggtactcagcacgactacgccttccatcagacata
gacaaatattcaagacgtatattcgtagatgaagttatggaactggttgagcttaagaaa
ctgaagaatgcaatggtaggtttaccaggattaaatggtcttgcagcagaagagcgcaaa
cgtctaacaattgcagtggaattagtttcaagtccttctatcatattcatggatgagcct
acaacaggtctagatgcacaagctgcagcaattgtgatgagaacagttagaaaggcagca
gacacagggcgtacaatcgtctgcacaatccatcagccaagcattgagatatttgaagct
tttgatgagttacttctaatgaaaaaaggtggacagcttatttacagtggacctttgggc
attttatctgggaatatgaggcaatactttgaagctattccaggagtaccaatgatcata
gatggtcaaaatcctgccacatggatgttagatgtcacttctcccgctatggagtataag
cttggcatagattttggaaccatctatcataactcatcattttacaaagacaatattaaa
ctggttgatgagtttagtgaaagacaaactaacacagaagacattcacttcatatccaaa
tatacacaaagtttttcatctcagtgtatatggtgcctgtggaaacagcatagatcttac
tggaagaatccagagcataatgtagttcgtttcatcattacagtctcaatatcacttcta
tttggcttagtcttctttggaattggttctaaaagagggacacaacaagatattctcaac
gttctaggagcaatgtatggttcagcactgtttcttgggtttgcaaatgctagcgtagta
caacctattgtggaaagggaaaggattgtattttaccgtgaaagagcagctgggatgtat
tcttctatgccatatgccatagctcaggtggccattgagattccttatatcctaattcaa
gttctaattttctcagccattgtttatccaatgatcggattcccatttacagtggcaaag
ttcttctggttcattctgttcttggtcttaagttttgtctatttttctctctttgggatg
atgacagtagcactgacaccaaacctagaaatagcagcccttctctcctttttcatcttt
gttatgtggaatatcttctccggattcttcattcctcgaaagatgatacctatttggtgg
agatggtattattgggccgatcctgctgcatggactatttatggtctaatggttacacag
gtgggaaacagtgatgatcccttgcatattgtgggctcattcgatatgacagtgaaggaa
tttctcgagcaatatcttggagtacaagagagctatctgccactcattgtgtctctccac
tttgcaataatcgtattatttctatttgtgtttgccttcagcatcaagtatctgaatttc
cagagaaggtag
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