Zingiber officinale (ginger): 121986417
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Entry
121986417 CDS
T08725
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 3-like isoform X1
KO
K10523
speckle-type POZ protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121986417
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
121986417
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BACK_BPM_SPOP
BTB
BACK
MATH
TRAF-mep_MATH
Phage_Gp84
Motif
Other DBs
NCBI-GeneID:
121986417
NCBI-ProteinID:
XP_042396300
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Position
1B:complement(160307686..160313715)
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AA seq
404 aa
AA seq
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MEEEKKVGHGEQNGLNVSRSKSICETVNGSHEYTIKGFSLAKGMGPGKYLSSDTFQVGGF
QWAIYFFPDGKNPEDNSLYVSVFIALASEGTDVRALFELTMLDQSGKGNHKVHSHFERAL
EGGPYTLKYRGSMWGYKRFYRRTALETSDYLRDDCLVMHCTVGVVRNRIETPTQFSINVP
SSDLGQCLKELLKSGIGSDIVFQVGDETFQAHKKILAARSPVFNAQFFGLIGNPDVDKIV
VDEVEPPVFKAMLSFIYSDELPDVDELTGSVSMSTFTIIIQHLLAAADRYGLERLRLLCE
VKLCDGITADTVATTLALAEQHQCVQLKNVCLKFIAVRENLGAVMQTEGFNYLEATCPSV
LAELLETVADDDSVSACRKRSASSNQGLNYLDSVDVSGKRSRRV
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagaagaaggtcggtcatggagagcagaacgggctcaatgtatcccgctcc
aaatcgatctgcgagaccgtgaacgggtcgcacgagtacaccatcaaggggttctcgctg
gccaaggggatgggaccggggaagtacttgtctagcgataccttccaggtggggggtttc
cagtgggctatttacttcttccccgacgggaagaaccccgaggataactccctctacgtg
tcggtcttcatcgccctcgccagcgaaggtaccgacgtccgggcactcttcgagctcacc
atgctcgaccagagcggaaagggcaaccacaaggtgcacagtcattttgagcgggcgctg
gagggtgggccgtacacgctcaagtatagggggagtatgtggggatataagagattttac
agaagaacagctttagaaacatcagactatctgagggatgattgtttggtcatgcattgc
acagtgggtgttgttagaaatcgtattgaaacaccaactcagttttccatcaatgtacca
tcatcagacttaggtcaatgcctaaaggagttactaaaatctggcattggctctgacata
gttttccaggttggggatgaaacatttcaagcacacaagaaaattcttgctgctcgctct
ccagtatttaatgctcaattctttggtcttattgggaatcctgacgtggataaaatagtt
gtagatgaggtggaacctcctgtgttcaaggccatgcttagttttatatattctgatgaa
cttcctgatgttgatgaattaactggttcagtttctatgtcgacattcacaataatcata
caacatttattggctgccgctgatagatatggtctagagaggttgaggttgttatgtgaa
gtgaaattgtgtgatgggatcactgcagatacagtagcaacaaccttggctcttgcagaa
caacaccaatgtgttcaactgaaaaatgtgtgtctcaaatttattgctgtccgagagaac
ttgggagctgtgatgcagactgaaggattcaactacttggaggccacatgcccatctgtg
ctcgcggagctcttggaaacggtcgcagatgatgactctgtttcagcctgccgaaagagg
agtgctagcagcaaccaagggctcaattacctggacagtgttgatgtgagcgggaaacga
tccagacgggtgtag
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