Zingiber officinale (ginger): 121986532
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Entry
121986532 CDS
T08725
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.6
KO
K14487
auxin responsive GH3 gene family
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121986532
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GFIT
Motif
Pfam:
GH3
GH3_M
GH3_C
MCM_bind
DUF3586
Motif
Other DBs
NCBI-GeneID:
121986532
NCBI-ProteinID:
XP_042396432
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Position
5B:complement(16430912..16435367)
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AA seq
500 aa
AA seq
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MVCEKELGGVELVREAQEASEQGPSPKSLSPSDEQLLTFLDLVVVACHRLFPPTRSANKV
LWFLYAGNVTATEAGYKVMAASAFPFHNNTPTPSPLLSMCVSPREVIVGADTLQQMYCHL
LCGLSLSASVDCIRVAKGEIARPQRPRRTRLKAITRELCDDIEYGSLSSEITEPSMRVAV
QELLGAPQPELATRIREICMRNNRRGILCRLWPKLCYIACVSTGSMEQYFSLIKHYAGDN
LPLLGGDYFASECPIGINMDRSRPPATTSFVIIPSAAYFEFLPFELGASPNVQETVDISG
VEVGKMYEVVVTTYRGLYRYRLNDVVKVVGFYNSSPRVEFITRAPKGDSEVFTERDLISA
MTTLGLMIGDGKGGEIVEFAGYLDPNSDQEHVIIFVELDKDCLFLQRENVDKSIGQLSRC
CQSLEACLGSVYKVKRAKGNLGLLELSIVKPGSFEGLARMAIKSGAPANQYKPAKILRTC
NFVNLLKENVILSSASELNI
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgtgaaaaagaactcggaggtgtcgagttggtgagagaggcacaggaagcaagc
gagcaaggcccttctcctaaatccctctctccctctgatgagcagttgttgacgtttcta
gacttggtggtggtagcatgccaccggttatttcccccaacaagatctgccaacaaagtt
ctatggttcctctatgcaggaaatgtaactgcaaccgaagcagggtacaaggtgatggct
gcttctgcattcccttttcacaacaacactccaacaccttcaccactgctctcaatgtgc
gtcagcccccgtgaggtcatcgtaggagcagacacccttcaacagatgtattgtcatctt
ctttgcggcctcagcctctctgcttccgtagactgcattcgtgtggcaaaaggcgaaatc
gcacgcccccagcgcccacgccgcacccgacttaaggccatcacgagggagctttgtgat
gacatcgaatatggatcactgagctcagagatcacagagccttccatgagagttgcagtt
caagaattgcttggagctccacagccagagttggctacaaggatacgagaaatttgcatg
agaaataataggcggggtattctttgccgcttgtggccaaaactttgttacattgcgtgc
gtcagcacaggaagcatggaacaatatttttcactcataaagcattatgctggtgataat
ttgccattgttgggtggagactactttgcttcagagtgccctattggcatcaacatggat
agaagtcgcccacctgctaccacaagctttgtgatcattccctcagcggcttactttgag
ttcctccctttcgagcttggagcttcacctaatgttcaagaaacagtagacatatctggt
gtagaggtaggaaagatgtatgaggtggtggtgactacttacagaggactttaccgctac
cgcttgaacgatgtcgtcaaggttgttggcttttataactcctcaccaagagtggaattc
atcacaagagcaccaaaaggagattcagaggtcttcacggagagagatttgatctctgca
atgactactttggggcttatgattggggatggaaagggaggagaaatagtggagtttgct
gggtatttggaccccaactcagaccaggaacatgttatcatctttgtggagttggacaag
gattgcttgtttctgcaaagggagaatgtggacaagtccattggacaactgagcaggtgt
tgtcagtcgcttgaagcttgtttggggagtgtttataaggtgaagagggcaaagggaaat
cttggtcttcttgagttgtcgatagtgaaaccaggtagctttgaagggttagcaagaatg
gccatcaagagtggagcacctgccaaccaatataaacctgcaaagatacttcggacctgc
aattttgtaaatttattgaaagaaaatgtcatattgagtagtgccagtgagctcaacatc
tga
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