KEGG   Zingiber officinale (ginger): 121987050
Entry
121987050         CDS       T08725                                 
Name
(RefSeq) SKP1-like protein 1B
  KO
K03094  S-phase kinase-associated protein 1
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03083  Polycomb repressive complex
zof04120  Ubiquitin mediated proteolysis
zof04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    121987050
   04120 Ubiquitin mediated proteolysis
    121987050
  09126 Chromosome
   03083 Polycomb repressive complex
    121987050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zof04131]
    121987050
   04121 Ubiquitin system [BR:zof04121]
    121987050
   03036 Chromosome and associated proteins [BR:zof03036]
    121987050
Membrane trafficking [BR:zof04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    121987050
Ubiquitin system [BR:zof04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     121987050
   Cul7 complex
     121987050
Chromosome and associated proteins [BR:zof03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     121987050
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     121987050
SSDB
Motif
Pfam: Skp1 Myb_DNA-binding NCH2
Other DBs
NCBI-GeneID: 121987050
NCBI-ProteinID: XP_042396891
LinkDB
Position
5B:130161546..130165973
AA seq 110 aa
MFWCIQAANYMDIKELLNLSCQSVADMIIEKTPGEIRKMFNIKNDFTPEEEEKVANYINI
KGLLDLLCQSVADMITGNTPEEIRKTFNIKNDFTFKEKEKVRRENQWAFQ
NT seq 333 nt   +upstreamnt  +downstreamnt
atgttctggtgtattcaggctgcaaattacatggacattaaggagttgctgaatttgtca
tgtcaaagtgtagctgatatgattattgaaaagactcctggagagattcgtaagatgttc
aacatcaagaatgacttcacccctgaagaagaggaaaaggttgcaaattacattaatatt
aaaggactgctggatttgttatgccaaagtgtagctgatatgattacgggaaatactcct
gaagagattcgtaagacattcaacatcaagaatgacttcacctttaaagaaaaggaaaag
gttcgcagggagaatcaatgggccttccaataa

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