Zingiber officinale (ginger): 121987867
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Entry
121987867 CDS
T08725
Name
(RefSeq) protein indeterminate-domain 12-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
121987867
Transcription factors [BR:
zof03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121987867
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-C2H2_4
zf-met
zf-C2H2_6
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
121987867
NCBI-ProteinID:
XP_042397515
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Position
5B:128846435..128848826
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AA seq
389 aa
AA seq
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MFLLATMSNSTSISEEASVSCETKVLYDRFSLSSLLTSQQQNQQLPPPKAKKKRNQPGNP
DPDAEVVALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRGSKEGTTRK
KVYVCPDPSCVHHHPSRALGDLTGIKKHFSRKHGEKKWKCDKCSKRYAVHSDWKAHVKAC
GTREYRCDCGTLFARKDSFITHRAFCDALAEESSRLMAASAAATTFPPLHHPHHFLASAS
SYWDPFSASNPNFILNPTPDCTQLASGNLELKSELNFPNSLLHHLPPTGTASSPHLSATE
LLQRATAMGSINIRNALSGLAYSTGATGGIYDDLTMWQKAGDRWTRDFLGVAAGEAPGNE
LLMDLVTASPVSDQSKQISMLPPVTGTWN
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgttcttattagcaacaatgtcgaattccacctccatctccgaagaagcgagtgtttcc
tgtgagaccaaagtgctctatgaccgcttcagcttgagctctttgcttacatcccaacag
caaaaccagcaattgccaccgccgaaggccaagaagaagagaaatcaaccagggaatcca
gacccagacgctgaagtcgtggccttgtcaccgaaaacactgatggccaccaataggttc
atttgtgagatatgtaacaagggtttccaaagggatcagaacctgcagctgcacaggagg
ggacacaacctgccttggaagctgaggcagagaggcagcaaggaaggaactacaaggaag
aaggtgtacgtgtgcccagacccgtcctgtgtgcatcaccatccttctagggctctcgga
gaccttacagggatcaagaagcacttctccaggaaacacggagagaagaagtggaaatgc
gacaagtgctcaaagagatacgccgtgcactccgattggaaagcccatgtgaaggcgtgt
ggaacaagggagtacagatgcgactgcggcactctcttcgcaaggaaggatagcttcatc
acgcaccgggccttctgcgacgccttagctgaagaaagttcacgactcatggccgcctcc
gccgccgcaaccacattccctccacttcaccaccctcatcatttcctcgcctccgcttcc
tcctactgggatcccttctcagcttctaaccctaacttcatacttaaccccaccccagac
tgcactcagttagcatcaggtaacttggagctcaagtctgaacttaactttcccaattct
ctcctccaccaccttccccccaccggaaccgcctcatcacctcatctctctgccactgag
ctactccagagggccacagctatgggttctataaatatcagaaacgccttaagtggcctg
gcttacagtaccggtgcaaccggcggcatttacgacgacctcacgatgtggcaaaaggcc
ggcgatcgttggaccagggacttcctcggtgtagcagccggagaggctcccggaaatgaa
ttactaatggatttggtgactgcttcgccggtgagtgaccagagcaagcagatctccatg
ttgcccccggtgaccgggacatggaactga
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