KEGG   Zingiber officinale (ginger): 121987879
Entry
121987879         CDS       T08725                                 
Name
(RefSeq) SKP1-like protein 1
  KO
K03094  S-phase kinase-associated protein 1
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03083  Polycomb repressive complex
zof04120  Ubiquitin mediated proteolysis
zof04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    121987879
   04120 Ubiquitin mediated proteolysis
    121987879
  09126 Chromosome
   03083 Polycomb repressive complex
    121987879
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zof04131]
    121987879
   04121 Ubiquitin system [BR:zof04121]
    121987879
   03036 Chromosome and associated proteins [BR:zof03036]
    121987879
Membrane trafficking [BR:zof04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    121987879
Ubiquitin system [BR:zof04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     121987879
   Cul7 complex
     121987879
Chromosome and associated proteins [BR:zof03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     121987879
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     121987879
SSDB
Motif
Pfam: Skp1 Skp1_POZ DarP
Other DBs
NCBI-GeneID: 121987879
NCBI-ProteinID: XP_042397524
LinkDB
Position
5B:complement(130180489..130181395)
AA seq 154 aa
MDKKKITLLSSDGEAFEVDVAVAMVSKTIEHMVEFDCAEDTIPLPNVTSRILVMIIEYCQ
KHVLDDPAKSSDDKEELKSWDDKFVKVDQATLFELMMAANYMDIKGLLDLLCQSVADMIT
RKTPEEIRKTFNIKNDFTPEEEEKIRKENQWASE
NT seq 465 nt   +upstreamnt  +downstreamnt
atggacaagaagaagatcaccctgttgagctccgacggcgaggcgtttgaggtggacgtt
gcggtggccatggtgtccaagaccatcgagcacatggtcgagttcgactgtgcagaggac
acgatccccctccccaacgtcacctccaggatccttgtcatgatcattgagtactgccag
aagcacgttctcgatgatcctgccaagtcgtccgatgacaaggaagaactcaagtcttgg
gatgacaaattcgttaaagtcgaccaggccaccctattcgaacttatgatggctgcaaat
tacatggacattaaggggttgctggatttgttatgccaaagtgtagctgatatgattacg
agaaagactcctgaagagattcgtaagacgttcaatatcaagaacgacttcacccctgaa
gaagaggaaaaaattcgtaaggaaaatcaatgggcctccgaataa

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