Zingiber officinale (ginger): 121987879
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Entry
121987879 CDS
T08725
Name
(RefSeq) SKP1-like protein 1
KO
K03094
S-phase kinase-associated protein 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03083
Polycomb repressive complex
zof04120
Ubiquitin mediated proteolysis
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121987879
04120 Ubiquitin mediated proteolysis
121987879
09126 Chromosome
03083 Polycomb repressive complex
121987879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121987879
04121 Ubiquitin system [BR:
zof04121
]
121987879
03036 Chromosome and associated proteins [BR:
zof03036
]
121987879
Membrane trafficking [BR:
zof04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
121987879
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
121987879
Cul7 complex
121987879
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
121987879
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
121987879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
DarP
Motif
Other DBs
NCBI-GeneID:
121987879
NCBI-ProteinID:
XP_042397524
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All DBs
Position
5B:complement(130180489..130181395)
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AA seq
154 aa
AA seq
DB search
MDKKKITLLSSDGEAFEVDVAVAMVSKTIEHMVEFDCAEDTIPLPNVTSRILVMIIEYCQ
KHVLDDPAKSSDDKEELKSWDDKFVKVDQATLFELMMAANYMDIKGLLDLLCQSVADMIT
RKTPEEIRKTFNIKNDFTPEEEEKIRKENQWASE
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaagaagatcaccctgttgagctccgacggcgaggcgtttgaggtggacgtt
gcggtggccatggtgtccaagaccatcgagcacatggtcgagttcgactgtgcagaggac
acgatccccctccccaacgtcacctccaggatccttgtcatgatcattgagtactgccag
aagcacgttctcgatgatcctgccaagtcgtccgatgacaaggaagaactcaagtcttgg
gatgacaaattcgttaaagtcgaccaggccaccctattcgaacttatgatggctgcaaat
tacatggacattaaggggttgctggatttgttatgccaaagtgtagctgatatgattacg
agaaagactcctgaagagattcgtaagacgttcaatatcaagaacgacttcacccctgaa
gaagaggaaaaaattcgtaaggaaaatcaatgggcctccgaataa
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