Zingiber officinale (ginger): 121987945
Help
Entry
121987945 CDS
T08725
Name
(RefSeq) truncated transcription factor CAULIFLOWER A-like
KO
K09264
MADS-box transcription factor, plant
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
121987945
Transcription factors [BR:
zof03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
121987945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
K-box
SRF-TF
Het-C
AvrLm4-7
NADH_u_ox_C
Motif
Other DBs
NCBI-GeneID:
121987945
NCBI-ProteinID:
XP_042397582
LinkDB
All DBs
Position
5B:139904040..139909915
Genome browser
AA seq
247 aa
AA seq
DB search
MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVAVIIFSAKGKLYEYSTD
SSMKNILERYEQYCYAEKALVSSELECQGNWHQECVKLKAKFEVLSKSQRHLMGEQLDSL
TLKELQQLENQLDNSLKHIRSRKNQVMSDSIAELVRKEKALQEQNKHLEKQIMEKQKAVA
LTQQLHWEQAQTRTSSPPPAFFMADHPNHGLNIGCYQGSTAMEEAVGAQVQINSSMLPPW
MLTHLNG
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggggagggggagggtgcagttgaagcggatcgagaacaagatcaaccggcaggtgacg
ttctcgaagcggcggtcggggttgctcaagaaggcgcacgagatctccgtcctctgcgac
gctgaggtcgccgtcatcatcttctccgctaagggcaagctctacgagtactccaccgac
tccagtatgaaaaacattcttgaacgttacgaacaatattgttatgcagaaaaggcactt
gtatcatcagaacttgaatgccagggtaattggcatcaagaatgtgtcaagcttaaggct
aagtttgaggttctaagtaaaagtcaaaggcatctcatgggagaacaacttgactccttg
accctcaaagaactccagcaactggaaaaccaactagacaattctttgaagcatattcgg
tcaagaaagaatcaagttatgtctgattctattgcggagcttgtgaggaaggaaaaggca
ctgcaggagcaaaacaaacatctagagaagcagatcatggagaagcagaaggcagtggct
ctcacccagcaactgcactgggaacaagcccagacaagaacctcctctccaccaccagcc
tttttcatggctgatcatcctaaccatggcttaaatattggatgctatcaaggaagtaca
gccatggaagaagctgtgggggctcaggttcagatcaacagcagcatgctaccaccatgg
atgctgacccatttgaacgggtag
DBGET
integrated database retrieval system
