Zingiber officinale (ginger): 121988473
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Entry
121988473 CDS
T08725
Name
(RefSeq) E3 ubiquitin protein ligase DRIP2-like isoform X1
KO
K16277
E3 ubiquitin-protein ligase DRIP [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121988473
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121988473
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121988473
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-RING_UBOX
zf-Nse
zf-C3HC4_3
RAWUL
zf-RING_10
zf-RING_6
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
121988473
NCBI-ProteinID:
XP_042397853
LinkDB
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Position
1B:163578020..163585904
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AA seq
436 aa
AA seq
DB search
MVDAGAAAAGPSKVVKVRREVLAGFMTCPLCCKLLRDATTIPECLHTFCRKCITKKLNDE
ETDHCPVCNIGLGVVPMEKLRPDHNLQDIRAKIFPSKQSKVEAPEETPTPILPVKRKEKS
LSSLVVSTSHVVTRTCSTGRQTKTASKRVVTARGLSSSTDASSEKDDNTVNNYVEKSSSN
EKMSKALKRKQAHSNVEPSNHMFQDNADIWDPLNCLVEAANRTKAFSSVTQRHVVKEENF
NGCDGEVNIKNERVKVHQHKSKILEQADNILLQPVTLKESRLQRVKRRSKDLTASSQSSL
DAQNSQFSRKINPIWFSLVPSTDQTIDQPFPHLSSNYLRINWAFWLVSVGLPPRDGSMPV
LLIHKYLVKKLKLENDAAVQITCLGQPVSPTMSVNKLVEHWLRERSSQRLQATVGTSAKE
FVMVLVYSWSKVSDNK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgcaggcgcagcggcggcggggccgtcgaaggtggtgaaggtgaggagggag
gttctggctggtttcatgacctgtcctctctgctgcaagctcctccgggacgccaccacc
atccccgagtgccttcacacgttttgcaggaagtgcataactaaaaaactcaatgatgag
gagacagatcattgccctgtatgtaatattggtttgggtgttgttccaatggagaagctc
aggccggaccacaatttacaggatattagggcaaagatttttccttctaaacaaagcaaa
gttgaagctcctgaggaaacacccaccccgatattacctgttaaaagaaaagaaaagtca
ctttcttcattggttgtcagcacttctcacgtagtgacacggacatgttcaacaggaagg
caaacaaaaacagcttctaaaagggttgtcactgcacgaggtctgagttcatccactgat
gcatcatccgaaaaggatgacaatactgttaataattatgtagaaaaatcaagctcaaat
gagaaaatgagcaaggccctaaagagaaaacaggctcattcaaacgttgagccatccaac
cacatgtttcaggataatgctgatatctgggaccctttaaactgtctggtggaagctgca
aacaggacaaaggcttttagctctgttactcagcgacatgttgtcaaggaagaaaatttt
aatggctgtgatggtgaagtaaatattaagaatgaaagggttaaagtgcatcagcataag
tctaaaattcttgaacaggctgataacattctattgcaaccagtaacactgaaagaaagc
aggctgcaaagagtcaagaggagaagcaaggatcttactgcatcatctcaatcatctctt
gatgctcaaaattctcaattttctagaaagattaatccaatatggttctccttggttcct
tctactgatcagacaattgatcaaccatttccacatctatcttcaaactatctgaggatc
aattgggcattctggttggtttcagttgggttacccccacgagatggtagcatgcctgtg
ttgctcattcacaagtaccttgtaaagaagctcaagctcgagaatgatgctgcggtgcaa
atcacttgccttggacagccagtaagccctacaatgtctgttaacaaactagtagagcat
tggttaagagagaggtcttcgcaaaggcttcaggctacggtaggaacctcagccaaggaa
tttgtgatggtgttggtctacagttggagcaaggtttcagacaacaaatga
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