Zingiber officinale (ginger): 121988575
Help
Entry
121988575 CDS
T08725
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121988575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121988575
03016 Transfer RNA biogenesis [BR:
zof03016
]
121988575
03012 Translation factors [BR:
zof03012
]
121988575
04131 Membrane trafficking [BR:
zof04131
]
121988575
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
121988575
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121988575
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
121988575
Translation factors [BR:
zof03012
]
Eukaryotic type
Elongation factors
121988575
Membrane trafficking [BR:
zof04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
121988575
Exosome [BR:
zof04147
]
Exosomal proteins
Proteins found in most exosomes
121988575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
AAA_22
SRPRB
FlpD
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
121988575
NCBI-ProteinID:
XP_042398004
LinkDB
All DBs
Position
6B:complement(103156999..103158806)
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKVHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLINEPKRPTDKPLRLPLQD
VYKIGGIGTVPVGRVETGVLKPGMVVTFGPTGLTTEIKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGFIKMIPTKPMVVETFSDYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPTGAKVTKAAAKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagagaaggttcacatcagtattgtggtcattggtcatgttgactctggcaag
tcaaccaccactgggcatctcatttacaaacttggtggcattgacaaacgtgtgatagag
aggttcgaaaaggaagctgctgagatgaacaaaagatcattcaagtatgcttgggtcctt
gacaagcttaaggctgagcgtgagagaggtatcactattgacattgctctttggaagttc
gagacaaccaagtactactgtactgtcattgatgctcctgggcatcgtgacttcatcaag
aatatgatcactggaacatctcaggctgactgtgctgttcttatcattgattcgacaact
ggtggatttgaggcgggtatctcaaaggatggccaaactcgggagcatgctttgcttgct
tttactcttggggtcaagcagatgatttgttgctgtaacaagatggatgcaaccaccccc
aagtattcaaaggccaggtatgatgaaattgtgaaagaggtttcctcttacctcaagaag
gttggctacaaccctgataagattccttttgttcccatctctggattcgagggtgacaac
atgattgagaggtctactaatttggactggtacaagggtcctactcttcttgaggccctt
gatttgatcaatgaaccaaaaaggccaacggacaaaccccttcggcttcccctccaggat
gtgtacaagattggtggtattggtactgttccagtgggacgtgttgagactggtgtccta
aaacctggcatggttgtcacatttggtcctaccggtctcacaactgaaatcaagtctgtt
gagatgcatcatgaagctctccaggaagctctaccgggtgacaacgtcggttttaacgtg
aagaatgtcgcagttaaagatctcaagcgagggtttgttgcatcaaactccaaggatgat
cctgccaaggaggccgcaaacttcacttctcaggttatcatcatgaatcacccaggtcag
attggcaacggttatgccccagtcttggactgtcacacctcccacattgctgtcaagttt
gctgagatcctcaccaagattgacagacgatctggcaaggagcttgaaaaagagcccaag
ttcctcaagaacggtgatgctggctttatcaagatgattcccaccaagcccatggtggtt
gaaacattctccgactaccctccgcttggtcgttttgctgtcagggacatgcgccagact
gtggctgttggtgtcatcaagagtgtcgagaagaaggatccaaccggtgccaaggtcacc
aaggcagctgccaagaagaagtga
DBGET
integrated database retrieval system
