Zingiber officinale (ginger): 121988620
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Entry
121988620 CDS
T08725
Name
(RefSeq) VAMP-like protein YKT61
KO
K08516
synaptobrevin homolog YKT6
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121988620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121988620
Membrane trafficking [BR:
zof04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
121988620
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
AcrIIA4
Motif
Other DBs
NCBI-GeneID:
121988620
NCBI-ProteinID:
XP_042398080
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Position
6B:complement(104125991..104131160)
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AA seq
208 aa
AA seq
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MKITALLVLKNSGAGDTSSSSSSGTDPVVLANASDVSHFGYFQRSAAKEFILFVSRTVAK
RTPAGQRQSVQHEEYKVHSYNRNGLCALAFMDDHYPVRSAFSLLNTVLDEYQKTFGESWR
VQQTDSTQPWPFLTEALTKFQDPAEADKLLKIQRDLDETKIILHKTIDSVLARGERLDSL
VDKSSDLSAASQMFYKQAKKTNQCCTML
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaagattactgccctcctcgtgctgaagaactccggtgccggcgacacctcctcctcc
tcctcttccgggacagatcccgtggtcctcgccaacgcctccgacgtcagccatttcggg
tacttccagaggtcggccgccaaggagttcatcctcttcgtctcccgcaccgtcgccaag
cgcacgcccgccggccagcgccagtccgtccagcacgaagagtacaaggtgcactcttat
aaccgaaatggcctttgcgctttggcttttatggatgatcattatccagtgcgaagtgca
ttttctctcttaaacacggtactggatgagtatcagaaaacttttggggagtcttggaga
gtccagcagactgattcaactcaaccatggccatttctaactgaagcattgacaaaattt
caggatcctgcagaggctgataagttgctgaaaattcagagggacctagatgaaactaag
attatccttcataaaactattgatagtgtgctcgcccgaggagaaaggttggatagccta
gtggacaagagttcagatctcagcgcagcatcacaaatgttctacaaacaagccaagaaa
accaatcaatgctgcaccatgctgtga
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