Zingiber officinale (ginger): 121988624
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Entry
121988624 CDS
T08725
Name
(RefSeq) ABC transporter G family member 39-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121988624
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
121988624
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
121988624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_16
AAA_29
AAA_25
AAA_23
AAA
nSTAND3
RsgA_GTPase
PDR_CDR
AAA_11
AAA_30
ABC_ATPase
DnaB_C
Motif
Other DBs
NCBI-GeneID:
121988624
NCBI-ProteinID:
XP_042398084
LinkDB
All DBs
Position
6B:complement(104152719..104164176)
Genome browser
AA seq
1514 aa
AA seq
DB search
MNSTAGLLRSSHSAREQEEEHHQHRQETLLHLLPKLPSIIYTPSPSRFSYALLFAGGRRG
SMANELPRTGSSRSWADSFRDASGVFLKSESSDDEEDLRQAALEKLPANGRARKGVVRPD
VADFSGEVELRRLGLHEKKLLLEKIFKVVEEDNERFLKRLRERIDRVGLELPKIEVRYQN
LSLEADVYVGSRALPSLWNTTLNILEGFFGLLQLSPSKKRTINILDNVSGILKPSRMTLL
LGPPASGKTTLLLALCGKLDNSLRKSGRITYCGHELSEFVPQRTCAYISQLDLHNGEMTV
RETLDFSGRCLGVGTRYEMLSELSRRERYAGIKPDPEIDAFMRATSIKGQKTSIATDYIL
KVLGLDICADILVGDEMRRGISGGQKKRMTTGEMLTGPARALFMDEISTGLDSSTTFQIV
KFIRQMVHVLDGTVLISLLQPAPETFELFDDVILLSEGQIIYQGPRENVLEFFGSLGFKC
PERKGVADFLQEVTSRKDQEQYWYVKDQRYRYISVSEFVQHFKSFHVGKRLSEDLVVPFD
RRKAHRAALTREKYGISKWELLKACLSREWLLMKRNSFLYVFKTTQITILSLIAMTVFLR
TTMHHNTIADGDKFYGSLFYSLVNVMFNGMADISMTIYKLPVFYRQRDFLFFPPWAFGLS
YWLLKIPLSLLESGIWIILTYYSIGFAPSVGRFFRQFLALFLVHQVSLSLFRFIAAAGRT
MVMANTFGTFALLIVFVLGGFVVSKDDIKPWWIWGYWSSPMMYGQNAIAINEFLDHRWNT
PNNDTNVNAPTIGTAILKSRGLFVDGYWYWISIGALVGFALLFNMLFILSLTFLNPIGSS
QHFVIDEESESNKRKNLLADKDQSFELIRSSWKSATPDLEAAGRRNSLEIESFNSSVHPA
RRGMVLPFQPLSLAFRHLNYHVDMPTEMKNQGVKEDHLQLLSNVSGALRPGVLTALVGVS
GAGKTTLMDVLAGRKTGGYIKGRISISGYPKKQETFARISGYCEQNDIHSPYVTVYESLV
YSAWLRLAPEIDKEIREMFVEEVMELVELDVMRDALVGVPGIDGLSTEQRKRLTIAVELV
ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVVCTIHQPSIDIFESFDELLLMKR
GGQIIYAGAIGHHSRKVIEYFQAVPGVPKINEGYNPATWMLEVTSPSVEDSINVDFAQVY
AHSSLCRKNKQLIKALFVPSVDSEDLHFPTKYAQSFGTQCIACCWKHYWSYWRNPQYNGV
RFFITIVIGLIFGTMFWQKGDNINKEQDVLDLVGAIYAAIFFLGATNAMTVQPVVGIERT
VFYRERAAGMYSALAYAFAQVNVEMVYVLAQGLIYTLLLFPMIGFGWHTSNFLWFLFFII
ACFSYFILYGMMVVALTPNHQVAAILSSFFYTFWNLYAGFLITRPSMPVWWRWYCWGDPV
AWTIYGLVASQLGQNDKSIEIPGESNVTVKQFLKHYFGYQHSFLAYVALAHLAFILLFFF
LFVYCIKYLNFQKR
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtacggccggattacttcgctcgtctcattctgcgcgagaacaagaggaagag
caccatcagcatcgacaagaaacgcttctccatctccttcccaaattgccatccattatt
tatactccctccccctctcgcttctcctatgccttactctttgcaggtggtcgccgcggc
tccatggcgaacgagctcccgaggaccggtagtagccggagctgggccgacagcttccgg
gacgcctccggcgtcttcctcaaaagcgaatcaagcgacgacgaggaggacctgcgacag
gcggcactggagaagctgccggccaacggccgcgcgcggaagggggtcgtgcggccggac
gtggcggatttcagcggtgaggttgaactccggcgcctcggactccacgagaagaagctt
ctgctggagaaaatcttcaaggtggtggaggaggacaacgagcggttcctcaagcgcctc
cgagaacgaatcgaccgggtgggattggaacttccgaaaattgaggttcgataccagaat
ctgtcactggaggcagatgtttatgttggtagcagagctcttccttccctgtggaatacc
accctgaacatcttagagggtttttttggtcttctgcaactctctccatccaagaaaagg
actataaatattcttgacaatgtcagtgggatactgaagccgtcaaggatgactttgctt
cttggacctccagcatcagggaagacaacactcttgcttgcactatgtgggaaacttgat
aattctcttaggaaatcaggtagaattacatattgtggccatgaactatcagaatttgtt
ccccagagaacttgtgcatatatcagtcaattagaccttcacaatggagagatgacagtt
cgagaaacccttgacttctctggacggtgtttgggtgtgggtacaaggtatgagatgttg
tcagaattgtcaagacgggagagatatgctggaattaagccagaccctgaaattgatgct
ttcatgagggctacatcaatcaaggggcagaaaaccagtatagcaacagattatatcctg
aaggtacttggtctggatatttgcgcagacatccttgttggtgatgaaatgagaagaggc
atctctgggggacaaaaaaagcgaatgaccactggagagatgttgactggtcctgcaaga
gcattgttcatggatgaaatatctactggacttgacagctctaccacttttcagatagtc
aagttcatcagacaaatggttcatgtcctggatggaacagtgttgatctctcttctacaa
cctgcacctgagacatttgaactttttgatgatgttatattactttctgagggacaaatc
atataccaaggtcctcgagagaatgttcttgagttctttggatctcttggtttcaaatgt
cctgaaaggaaaggggtcgcagattttcttcaagaggtaacttcaagaaaggatcaagaa
cagtactggtatgtcaaggaccaacgttaccgttatatttcagtttcagagtttgtgcag
cattttaaatcatttcatgttggaaaacggctttcagaggacctagttgttccttttgat
agaaggaaagcacatcgtgctgcactcactagagaaaaatatggcatttctaaatgggaa
cttctcaaggcttgcttgtcaagagaatggttgctaatgaaacgcaactcatttctctat
gttttcaaaactacccaaataaccatactttcattgatagccatgactgtgtttctaaga
actacaatgcatcataacacaattgccgatggtgacaagttctatggctcattgttttac
agtttggtcaatgtgatgtttaatgggatggcagatatatcaatgaccatctacaagttg
ccagttttctatagacaaagagatttcttatttttcccaccatgggcttttggattgtca
tattggctcctgaagattcctctatccttgttggaatctggaatctggattatcctgaca
tactactcaattggttttgctccctccgtcggacgtttcttccgtcagttcctagcactt
ttccttgtacaccaagtgtctctctctcttttccgctttattgccgcagctggaagaact
atggttatggccaatacatttggaacatttgctctacttattgtgtttgttctaggagga
ttcgtcgtctctaaagatgatatcaagccttggtggatctggggttactggagttctccg
atgatgtatgggcaaaatgcaatagctattaatgagttccttgaccatagatggaacact
ccaaacaatgacaccaatgtcaatgcaccaacaataggaacagccattctaaaatctcga
ggactgtttgttgatggttattggtattggatttctatcggagcacttgtaggctttgcc
cttctcttcaatatgttgtttatactttcacttacctttttgaaccctattggaagttct
caacattttgtcattgatgaggaatcagaaagtaacaaaagaaagaatttgttagcagac
aaagaccagagttttgaactgataagaagtagctggaaatctgctacacctgatttagaa
gctgctggtcgaagaaacagcttggagattgagagtttcaattcttcagttcatccagct
aggaggggaatggtgctgccttttcagccactttctcttgctttcagacatttgaactac
catgttgatatgcctacagaaatgaagaaccaaggagtcaaggaagatcatctccaattg
ctatctaatgtaagtggtgcattgaggcctggtgtgctgacagcattggttggagtaagt
ggagcaggaaagactaccttaatggatgttctggcaggaagaaaaactggtggttatatt
aaaggccgtatcagcatttctggctatcctaaaaagcaagagacgtttgctcggattagt
ggttactgtgaacaaaatgacatccactcaccttatgtgactgtttatgaatcgcttgta
tactctgcttggctgcgtcttgcccccgaaatagacaaggaaatacgagagatgtttgtg
gaggaggtcatggagttagttgaactggatgtaatgagagatgctttggttggagttcca
gggattgacggtttatcaacagagcagagaaaaagactcacaattgctgttgagctggtc
gcaaatccatccattattttcatggacgagccaacatcaggtctagatgctagagctgca
gccatagtcatgcggacagtgagaaacacagtgaacactggacgaactgttgtttgtaca
atccaccaaccaagcatagacatatttgaatctttcgatgagctacttttgatgaagagg
ggaggtcaaattatatatgctggagcaattgggcatcactctcgcaaggttatagaatac
tttcaagcagttcctggggttcctaagattaatgaaggctataaccctgcaacatggatg
ctggaagtaacttctccttcagttgaagatagcattaatgtggattttgctcaagtatac
gctcactcctctctttgccggaaaaataaacaacttatcaaggcactgtttgttccttca
gtggattcagaggacttgcattttccaacgaaatatgcccagagttttggtactcaatgc
atagcttgttgttggaaacactactggtcatattggagaaacccacaatataatggtgtc
cggttcttcattacaatagtcatcggccttatttttggcaccatgttttggcaaaagggt
gacaatataaacaaggaacaagatgttttggatctagttggagctatatatgctgctatt
ttctttcttggagccaccaatgctatgacagtgcaaccagttgtgggtattgaaaggact
gtcttttatcgtgaacgagcagcagggatgtattcggccctggcttatgcgtttgctcaa
gttaacgtcgagatggtatacgtactggcacaggggctgatctacaccctgctcctcttc
cccatgattggctttggctggcacacaagcaacttcctttggttcttattcttcattata
gcatgtttttcctacttcattctctatggtatgatggtggtagcactcacacctaaccac
caagtcgcggcaatcctctcaagtttcttctacaccttctggaacttgtacgcaggcttc
ctaataacccgaccgtcaatgcctgtatggtggaggtggtattgctggggtgaccctgta
gcttggacgatatatggtcttgtggcatcccaacttggacagaacgacaaatcgattgag
atccccggagaaagcaatgttacagtgaagcaattcctgaaacactactttggctatcaa
catagtttccttgcctatgttgctttggctcacttggctttcatcctcctcttcttcttc
ctctttgtttactgtatcaagtacctcaacttccagaaaagatga
DBGET
integrated database retrieval system
