Zingiber officinale (ginger): 121988666
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Entry
121988666 CDS
T08725
Name
(RefSeq) RNA-binding protein 208-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121988666
03041 Spliceosome [BR:
zof03041
]
121988666
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
121988666
Spliceosome [BR:
zof03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121988666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_8
Motif
Other DBs
NCBI-GeneID:
121988666
NCBI-ProteinID:
XP_042398142
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All DBs
Position
6B:104807623..104816883
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AA seq
435 aa
AA seq
DB search
MNQRLKLQQQQALMQQVMLQQQQQQQIYHSGVLAAAMSQMEPVPSGNLPPGFDPSTCRSV
YVGNIHQNVTESLLAEVFQSVGPLEGCKLIRKEKSSFGFVDYHDRRSAALAIMSLHGRQI
YGQAIKVNWAYASGQREDTSGHYHIFVGDLSPEVTDATLFACFSVYPNCSDARVMWDNKT
GRSRGFGFVSFRNQQDAQNAINDMTGKWLGSRQIRCNWATKTTGEDKPQSEDHNAVFLTE
GSSNPGTDGAQESTNEMIPENNPAYTTVYVGNLAHEVTQTELHLQFHILGAGVIEEVRIQ
RDKGFGFVRYGSHDEAALAIQMANGRIVCGKSMKIQLLLQCSWGTKPTPPGTASNPLPLP
IPPFQLVPMPDLQGFTATELLAYQRQLALSQAAAGTMVGQHGLAAAQAPAGIGGSQVIYE
GYPNLSSAQQLLYYD
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaggttgaagctgcagcagcagcaggccctgatgcagcaggtcatgctccag
cagcagcagcagcagcagatttaccattccggggtcttggctgccgccatgtcgcagatg
gaacctgttccaagtggcaatcttccgcctggttttgatccatccacatgccgcagtgta
tatgtgggcaatatccatcaaaatgtgacagagagcctgcttgcagaagtttttcaaagt
gttggtccacttgaaggatgcaaactaatcagaaaagaaaagtcttcttttgggtttgtt
gattaccatgatcgaagatctgcagctcttgcaatcatgtcattgcacggacgacagata
tatggccaggcaatcaaggtgaattgggcatatgccagtggtcaaagggaagacacttct
ggacattaccatatttttgttggtgacttaagtcctgaggtcactgatgcaacacttttt
gcatgcttctcagtgtaccctaattgttctgatgcacgggttatgtgggataataaaact
gggcgctctagaggatttggctttgtttcttttcgcaaccaacaggatgctcaaaatgct
attaacgacatgactggcaaatggcttggaagccgacaaataaggtgcaattgggcaacc
aagactactggagaagacaaaccacaaagtgaggatcataatgcagtttttttgacggaa
ggaagtagcaaccctggaacagatggtgcccaagagagtacaaatgaaatgatccctgag
aacaaccctgcatacacaacagtttatgtcggtaatctggcccatgaggtaacacaaact
gagcttcatctccaattccatattctaggggctggtgtgatcgaggaagtgaggatacaa
agggataaaggatttggattcgtgagatacggtagccatgacgaagctgctttagccatt
caaatggctaatggaaggatagtttgtggaaaatcaatgaaaatccaattactcttgcag
tgttcttggggcaccaagccaactccaccaggaacagcttctaatccactaccgcttccc
attcccccatttcagcttgttccgatgccagatctccaaggttttacagctactgagctc
ctggcgtatcagcgtcaactggctttaagccaggcggctgctggaacaatggttggccaa
catggacttgctgctgcacaggctccagcagggattggtggttctcaggtgatctatgaa
ggttaccccaatctttcatctgctcaacagctactttactacgactaa
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