Zingiber officinale (ginger): 121988727
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Entry
121988727 CDS
T08725
Name
(RefSeq) two-component response regulator ARR2-like isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121988727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
121988727
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
121988727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
121988727
NCBI-ProteinID:
XP_042398240
LinkDB
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Position
6B:106385238..106391192
Genome browser
AA seq
681 aa
AA seq
DB search
MLDSEGAAAAPEFPVGLRVLLVDDDPTCLKILDRMLRKCLYHVTTCSQAMAALNILRAKK
ECFDLVLSDVYMPDMDGFKLLEHIGLEMDLPVIMMSADDHKDVVMKGVTHGACDYIIKPV
RMESLKNIWQHVVRKKKNESKELDNSGSLDDNDRQRGVVDEGDNASSVCAGSWKSVKRKK
VEGKDDDDDDEAVEEHEDPSHAKKSRVVWSVDLHQKFVNAVHHLGVDKAVPKKILELMSV
AGLTRENVASHLQKYRLYLRRVSMPQYQGRLDSFAGCQDASYGSVGLIDSFNVHGLAVST
QIPLQSRTSIHPAPRSNTNVGIGASTVGQLGLIASGAPPNMVFPSVQQMNKQMSNTRGSS
SNIQSSQLGQTPSVVQPYGSMSLQFGEEMPNFLTSSQASNFSLPGGTMSEQMNKSLTMQQ
THNLQQFSFSQPRSNISILHSSGQLLNNNASNSSRFSSALMQQTSSNESSNHILGRLGIT
TNITSSPANYMKSSFSSFPQDLYVDAQSSFMNELSGNSYPSSSCIGVSPQTTSFQSLGSN
NDLKGKIENVPGFNTINEHQNRSHEWKLQSVNIPYQTDHIVDFEQSNILSHSSLMSHHNT
VATVSNRDNNSSVTVKEEIISLSNDIDVEKTTSFAQHKNANIDDDSIRLHYGVGPDMSYQ
DVLLDDIQNELMTVVGNQDPC
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgctggattccgagggtgctgctgcggcgccggagttcccagtcggcctccgggtgctc
ctcgtcgacgatgaccccacctgccttaagatcctcgaccggatgctccgcaagtgcctc
taccacgtgacgacttgctcccaggcgatggcggcgcttaatattttacgagcgaagaag
gagtgcttcgatttggtgctgtccgatgtttacatgcccgatatggacgggttcaagttg
ttggagcatatcgggttggagatggatctccctgtcatcatgatgtctgcggatgaccat
aaagatgttgtcatgaagggtgtcacacatggtgcctgtgattatatcataaagcctgtt
cggatggagtcactgaagaatatatggcagcatgtggtgaggaagaagaaaaatgaatcg
aaggagttggataactctgggagtcttgacgataatgataggcagagaggggttgtggat
gaaggagacaatgcttcctctgtgtgtgcagggagttggaagagtgtgaagaggaaaaaa
gtggaagggaaggatgatgacgacgacgacgaggcagtggaagagcatgaagacccttca
catgcaaagaaatctagggttgtatggtctgttgatctccaccaaaaatttgtgaatgct
gtccatcatctgggcgttgacaaggctgttcctaagaaaattctcgagttgatgagtgta
gctggacttaccagggaaaatgttgcaagtcacttgcagaaatatcgcctatatttgaga
agagtaagtatgccacagtatcagggaagactagattcatttgcaggttgccaggatgca
tcttatggatcagtgggtttgatcgacagttttaatgttcacggtcttgctgtttctact
cagattcccctacaaagccgaacatcaatacacccagcaccgagaagtaacacaaatgtt
ggcatcggtgcgtcaactgttggtcaattaggtctcattgcttctggtgcaccaccaaac
atggttttcccatctgttcagcaaatgaataaacagatgagcaacactcgtggatcctct
agcaacattcaatcaagccaattagggcagacaccctcagtagttcaaccatatgggagc
atgagtttacagtttggggaagaaatgccgaattttcttacatcttcacaagcatcaaac
ttctcgctgcccggaggcactatgagtgaacaaatgaacaagtcattaacaatgcagcag
actcacaatttgcaacaattttctttctctcagccaaggagcaatatcagtatcctacat
tcaagtgggcaattattgaataataatgcaagtaatagttctaggttttcatcagcttta
atgcagcaaacatcttcgaatgagagctcaaatcatattttaggaaggctgggcattacc
acaaatattacatcctcacctgccaactacatgaagtcatcgtttagttcctttcctcag
gacctctatgtcgatgcacagagcagcttcatgaatgaactatctggaaattcctatcct
tcttcaagttgcattggagtttcaccacagacgacaagtttccagtcgctcggtagcaat
aatgacttgaaaggaaaaatcgaaaatgttccaggtttcaataccatcaatgaacatcaa
aacagaagccatgagtggaagttgcaaagtgttaatattccataccaaacagatcatatt
gttgactttgaacaaagcaatatactgtctcactcgtcgttaatgagtcatcacaataca
gttgctactgtgtctaatagagataacaatagcagtgtcacagttaaagaagaaataata
tcactgtcaaatgatattgatgttgagaaaacaaccagttttgctcagcacaaaaatgca
aatatagatgatgactccatcagattacattatggagttggtccagacatgagttatcaa
gatgtgttgctcgatgacatacaaaatgagctcatgactgttgtcggaaaccaggatcca
tgctga
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