Zingiber officinale (ginger): 121988744
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Entry
121988744 CDS
T08725
Name
(RefSeq) Fanconi anemia group I protein-like
KO
K10895
fanconi anemia group I protein
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
121988744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zof03400
]
121988744
DNA repair and recombination proteins [BR:
zof03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
121988744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S2
FANCI_HD1
FANCI_S1
Motif
Other DBs
NCBI-GeneID:
121988744
NCBI-ProteinID:
XP_042398278
LinkDB
All DBs
Position
6B:106893620..106899800
Genome browser
AA seq
1396 aa
AA seq
DB search
MASEAEILRRDRPPPPLTAEAIITLAQDPSATLPPVADPAALLAPLDHPFPTFPVSTYLS
ALLSLLSRSRSPPSSSLLSSLLISFLTMFHSRRFPRHDAALLLRLFTPHLSFLDRSQILA
LVDLILSRLSEIADPEDALPLDHLPRLFELAGVCEPVDLTVERLLAAEWSKALLLKVVAL
LRELPPIGRARVSDFLDRVFLQMKGVDLQDLPSLIYQLLLLASKCIHRKEVIRGILAFLG
SCSKGRPSIMRQVEGTILMHVNFAVKQDPSLGQEMLMVIRSDLQLLNHFAVTVLFSMARV
RRFNESSIVVLKLAVVTSLRNFRISRNSEWLPDKLREDCLETAKFVENSVLKAVNESNSG
REHVVPSIVQFGFLLLENVDDNTCKQVSPGLMNIRELSIQILRTVFEVHDMSRNEIIEQC
KFRIISLKPQKSMQIIKLLSNLVRSYPYAILQYVAHLKEALDYFTFLQEIVAVALVDAIL
PLVRFCSDLQDYIILVVRKAMFKREDTIRIAATIAVVNLICIESKSNRNEENILQESSSQ
ASCSQQAEIPSRREGNLFLELSGLFRRCLTQQVRVKEILYEGLVKLVMSDPSCTSSILDI
LWPHFFQVCTEDKDFPLQLDSCFRLENGKVRQVEPLDHLLSCVSWILHQSHGVNQSENSW
QCFGFSLTQQENEAGKATSAELFSKALSKIRKNLKNCKLQDYEVQAEESSRQHLLDEKII
CNCQILLRLIEVLVNIVVIDLEKAESSEKLVLEKEIMEFSEFYDFVEKELIKISQRTGNR
KGSSSDLLNKVNSELKEIAQVNQARTFFATTTVHHLLVLSFNSCKIYFTSRQNASQKSSE
SSTAALCLKTMSFSLKVCLRHLKSVYSMKREQSGDPFSELLCGDIKCLGKSVMQLVLQLK
STVEQEKDMKKKDAQGKISNGHARDLLFLSLMCLIELFKMNLSEDNLYELVTDLLTVNSL
DLYLHAKDAAAEDINQNKNFVDDYQNMSCLHLFLEKVIEPLHSSLLDQSLFQECEVLAEL
LLITGKMLPPGKRNFHGSWAMKICQSRKVENPGAARSVFSLAIHLTPTQPDLTVANDMAT
ELLKVMGSEDSEPEEMSVKFPVINQSTRNAISTIILQVAESCLGDLDWVISKIKAIFAYN
REQPGLMTNLQFGEKLSGLELEDVLCARSESLVYLLSSFVMMNLKDSRAEQLLKVATRFY
KILALVAKLQIAPKGCKQFLPSRRFQKLTEVTCTRLTSPLYGFVALVQRNQQERASQRGI
INKIKRENRCIPDLIFQIEDYEKYLIQLSKMTKVNLLRHAKRSTARDFKILETKKVPVEE
EAPEHEPTPSHSTSENELNRESEETDDDNIPKRASPEPIRDIVDEDSENGGDDQEILIRK
KRAKMRKVVENSDAES
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgaagctgaaatcctccgacgcgaccgtcctccaccgcccctcacggccgaa
gccatcatcactctagcacaggacccctctgccaccctcccacccgtcgccgacccagcc
gccctcctcgcccctcttgaccacccatttcccaccttcccagtctccacctacctctcc
gccctcctctctctcctctcccggtcccggtcccctccgtcctcttctcttctctcatct
cttctcatttccttcctcaccatgttccactcccgtcgtttccctcgccacgacgcggct
cttctcctccgactcttcactccgcacctctccttcctcgaccgctctcagatcctcgcc
ctcgtcgacctcatactttcccgtctctccgagattgccgaccctgaggacgccctgccc
ctggaccaccttccccgactctttgaactcgccggagtctgcgaacccgtcgatctgacc
gtcgaaaggctcctcgctgccgagtggtccaaggctttgttgctcaaggtcgtggcactc
ctccgtgaactgccgccaatcggcagagctagggtttctgatttcctagatagggttttt
ctgcagatgaaaggggtcgacctccaggatttgccgtctcttatctaccagcttcttctg
ctcgcctctaagtgcatacatcggaaggaggtgataaggggtattctagcgtttttggga
agctgctcgaagggtcgtccttcaatcatgagacaggtggaagggacgattttgatgcac
gtgaacttcgccgtgaaacaggatccatcgttggggcaggagatgttgatggttatccga
tctgatcttcagcttcttaaccacttcgcagtcaccgtgctcttctccatggccagggtg
cgccgattcaacgagagctccattgttgttctgaaattggcggtagtcacctccttgagg
aactttcggatctcaaggaatagcgagtggttgccagataaactaagagaagattgctta
gaaactgccaaattcgtagagaactcagtgctcaaagctgtcaatgaaagcaactctggg
agagagcatgttgtacctagcattgttcagtttggatttcttttgctagaaaatgttgat
gataacacctgcaaacaagtctctccaggtttgatgaatattagagaactcagtatacaa
atcctgaggacagtctttgaggtccatgacatgtcaagaaatgagataattgagcaatgc
aaattccgaattatttctttgaagcctcaaaaaagcatgcagatcattaagttgctaagt
aatttggtccgaagctacccttatgcaattctacaatatgtagcacatttaaaggaagca
ttggactatttcactttcctgcaagagatagttgcagtagctctcgtcgatgctatcctg
ccacttgtcagattctgctctgacctccaggattatattattttggtagttcgaaaggcc
atgttcaaacgagaagacactattcgtatagcagcaactattgctgtagttaatctgatt
tgcattgagagtaaatcgaacagaaatgaagaaaacattttgcaagaatcgtctagccaa
gcaagttgtagtcagcaagcagaaatacctagcaggagggagggtaatctgttcctggaa
ctaagtggattgtttaggagatgtcttacccagcaggttagagtcaaagagatattgtat
gagggtctcgttaaactagtcatgtcagacccatcatgcacaagctccatcttggatatt
ctctggcctcatttcttccaggtttgcacagaggacaaagattttcctcttcagcttgat
tcttgcttcaggttggagaatggaaaagttcgccaagtagaaccactggatcaccttttg
tcatgcgtctcttggatacttcatcagtcccatggtgttaatcaatcagaaaattcatgg
cagtgctttggcttctcactaacacaacaagagaatgaggctggaaaagcaacatctgca
gaattattctcaaaagccttgtctaagatcaggaaaaatttaaagaactgcaaattgcaa
gattatgaagtccaggcagaagaatcttctcgtcagcatttgctggatgagaaaataatt
tgcaattgtcagattttgcttcgacttattgaggtccttgttaatattgtagttattgac
ctggagaaagctgagagctcagagaagctagtgcttgagaaagaaattatggaattttct
gaattttatgatttcgtcgaaaaggaattaattaaaatttcacagaggacaggcaatcga
aaaggttcttcaagcgacctcttgaataaggtcaatagtgagctaaaagagattgcacaa
gtaaatcaagcaagaaccttctttgcaaccacaacagttcaccatcttcttgttctttcc
tttaattcatgcaaaatttattttacaagtagacaaaatgcttctcagaaaagcagcgag
tcatcaacagcagccctttgtttgaagacaatgtccttcagcttaaaagtgtgccttcgc
catctgaagtctgtttactcaatgaaacgtgaacaaagtggtgatcctttcagtgaactg
ttatgtggagatatcaaatgtctagggaaatcagtaatgcagcttgtgttacaactcaag
tccactgttgaacaagagaaggatatgaaaaagaaagatgcccaagggaaaataagtaat
ggacatgcaagggatctattattcttatcattgatgtgcttgattgagttatttaagatg
aatttatctgaggataatctgtatgaattagttactgatttgctcacagtgaattctcta
gatttgtatttgcatgcaaaagatgctgctgctgaggacattaatcagaacaaaaacttt
gtagatgactatcaaaatatgagttgtctgcatttgtttttagagaaagtaatagagcca
ttgcattcctcacttctagaccagtcactttttcaggaatgcgaggtgcttgccgaatta
ttgttgattactggaaaaatgttgccaccgggaaaaaggaatttccatggaagttgggct
atgaaaatatgccagagcagaaaagtggaaaatcctggcgcagcacgaagtgtcttctca
ctagctattcatctgacaccaacccaacctgatctcactgttgcaaacgacatggctaca
gaactgctgaaagttatgggatctgaagatagtgagcctgaagagatgtctgtaaagttc
ccagttattaatcaatcaacaagaaatgctatctctactatcattttacaagtggctgaa
tcttgtcttggtgacttggactgggtcatctcaaagattaaggcaatttttgcatacaac
cgtgaacaacctggtctgatgactaaccttcaatttggtgaaaaattgtcaggacttgaa
ttggaagatgtcctctgtgcaagatcagaatcactcgtgtatttattatcttcttttgtg
atgatgaaccttaaagactcacgagcagagcagttactgaaggttgctactaggttttac
aaaattttggctcttgttgcaaagcttcagattgctccaaaaggttgcaaacaattccta
cctagccgaaggtttcagaagttaacagaagtgacatgcacacggctaacaagtcctcta
tacggtttcgtagctcttgttcaaaggaatcagcaagaaagagcttcacaaaggggaatc
atcaacaagatcaaaagggaaaatagatgtattcctgatttgatattccagattgaagat
tatgagaaatatctcattcagcttagcaaaatgactaaagtcaatttgttgaggcacgcc
aagcgcagcacggcaagggattttaagattttggaaaccaaaaaggttccagtggaagaa
gaggcaccagagcatgagcctactccatcccattctacatctgagaatgaattgaacaga
gaatctgaagagactgatgatgataatatacccaagcgtgcttctcctgaacccatcagg
gatattgttgatgaagattctgaaaatggcggagatgatcaagagatattgataagaaag
aagagagcaaagatgcgcaaggttgtagaaaactctgatgccgaatcatga
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integrated database retrieval system
