Zingiber officinale (ginger): 121988770
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Entry
121988770 CDS
T08725
Name
(RefSeq) KH domain-containing protein At4g18375-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121988770
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
121988770
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
KH_5
Motif
Other DBs
NCBI-GeneID:
121988770
NCBI-ProteinID:
XP_042398315
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Position
6B:107718079..107723815
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AA seq
544 aa
AA seq
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MAGRRNNNGKRSYSHSDHSENGGSKRRNPGDERDTYIPGHEDTVFRYLCPGKKIGSIIGR
GGEIVKQLRSDTQAKIRIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVH
ERLVTDEVVAEEDSDGDSPQVTARLLVPSDQIGSIIGKGGQIIQGIRSDTGAQVRILKND
RLPACAISGDELLQISGEASVVKKALLQVSSRLHDNPSRSHHLLFAGSPSVFPGASQFGV
SSNAGPLIGIGPLVGSYRGYKGEAPVDWLYPPSRDEGAAKEFSLRLLCPAANIGSVIGKN
GVIINQIRQESGASIKVDSNSVEDDCIITISAKEFFDDPISLAIDAAVRLQPRCSEKSEK
ESGEFSYTTRLLVSTLQIGCLIGKAGSIISEMRRATRANIRVLSKENVPKVASEDDEMVQ
ISGEIDIARDALVHVTTRLKANLFERDSTSAAHGSSAPHHRFPVDASDGPKYHGGRDSKS
HGHGFSYSGGYGTSRNLLPSDTYAGYGSSQGGGSNYSSYDGYSSRYGNIGLSGPNRSHGK
HHDY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggctggacgcagaaacaataatgggaaaagatcttactctcactctgatcattctgaa
aatggaggaagcaagagaagaaatcccggtgatgaaagagacacctacattcctgggcat
gaggatactgttttccgttatttatgtccaggaaagaaaataggaagcatcattgggaga
ggtggcgagattgtgaagcaactgagatctgatacacaagctaagattagaattggggag
actgtacgtggttgtgatgagcgtgtcattgccatttttagcacaagggaggaaaccaat
atatttgaagatagtgatgacaaaatgtgtcctgctcaagatgctctattcaaggtccat
gagcgacttgttactgatgaggtagtggccgaagaagatagtgatggagatagtcctcaa
gttactgctcgacttcttgtgccttctgatcagattggtagtatcattgggaaaggagga
caaatcattcaaggaattcgtagcgatactggtgctcaagtccgcattcttaagaatgat
cgcctcccagcttgtgccattagtggtgatgagctactccagatcagtggagaagcatca
gttgtgaagaaggctcttcttcaagtttcatcacgtctccatgataatccatctcgttca
caccaccttctatttgccggttcaccatcagtgttccctggtgctagtcagtttggagtc
tcaagcaatgctggcccattaattggtattggccccttggtaggctcttatagaggttat
aaaggagaagcacctgtagattggctttacccaccttcaagagatgaaggtgctgcaaag
gagttcagcttacgtcttctctgtcctgctgcaaacattggaagtgtaataggaaagaat
ggtgtgatcattaaccaaataaggcaggaatctggagcttctattaaagtagatagtaac
tctgttgaagatgactgcataatcacaatttctgctaaagagttcttcgatgatccaatc
tctctcgcaatagatgctgcagttcgcttgcagccgcgttgtagtgaaaaaagtgaaaaa
gaatcaggtgaattttcatataccacccgccttctggtatccactttgcagattggttgc
ctgattggtaaagctggatcaatcatttctgagatgaggagggctacaagagccaacata
cgtgtgctttcaaaagaaaatgttccgaaagttgcttctgaagatgatgagatggttcag
attagtggagagattgacattgcaagagatgcacttgtccatgtgacaactcgtctaaaa
gccaatttatttgaaagggatagtacatcagctgcacatggttcttctgctcctcaccat
cgttttccagttgatgcttctgatggtccaaaatatcatggaggcagggatagtaaatca
catggtcatgggttttcatattctggtggatatggtacttcccgtaatttgctaccgtct
gatacttatgcaggctatggcagttcgcaaggtggtggtagcaattatagttcatatgat
ggatactcttcacgttatggaaacattgggttatctggtcccaacagatcccatgggaaa
catcatgattattaa
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