Zingiber officinale (ginger): 121988855
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Entry
121988855 CDS
T08725
Name
(RefSeq) syntaxin-32-like
KO
K08490
syntaxin 5
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121988855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121988855
Membrane trafficking [BR:
zof04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
121988855
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
MipZ
Syntaxin-18_N
Use1
DUF4715
Motif
Other DBs
NCBI-GeneID:
121988855
NCBI-ProteinID:
XP_042398480
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Position
6B:complement(109524827..109531637)
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AA seq
343 aa
AA seq
DB search
MSTRAGQASYRDRTQEFLKVVENCKKSSSTVDGPSSSTAPYLEGPKSAASIQSEFSRRAS
QIGLGIHQTSQKLSKLAKLAKRTSVFDDPTIEIQELTSVIKKDITALNSAVVDLQLLCSL
QNESGNLSRDTTNHSTTVVDNLKNRLMSTTKEFKEVLTMRTENLKVHESRRQLFSSSASK
EAANPFLRQRPLVSKGSNESSAPPAPWENGSTSSSPLFPRRKSNGDPSSTQPLIPQQQQQ
QQQQEMVPLQDSYMQSRAEALQSVESTIHELSNIFTQLATMVSQQGELAIRIDENMDDTL
ANVEGAQGQLLKYLNSISSNRWLMIKIFFVLMFFLMIFLFFVA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgagtactagggcggggcaagcgtcataccgtgatcggacgcaggagttccttaaggta
gttgagaattgcaagaagtcctcgtcgactgtagatggaccgagcagcagcactgcgcct
tacttggaaggacctaaatcagcggcttccattcagtcggagtttagcaggagggcttcg
caaattggacttggcattcatcagacttcacagaaactctctaagcttgcaaaattggca
aaaaggacatcagtttttgatgaccctactatagagattcaagaattaacgtcagttatc
aagaaggatattactgctttaaatagtgcagtagtagacctgcaactcctctgtagtttg
cagaatgaaagtggaaatttgtctagggatactaccaatcactctactactgttgttgat
aacttgaagaatcgcttgatgagcactacaaaggagttcaaagaagttttaaccatgaga
actgagaacctgaaagttcatgagagtagaaggcagttattttcttcatcagcatcaaag
gaagcagctaatcctttccttagacaacgaccacttgtttctaaaggaagtaatgagtct
tctgctcccccagcaccatgggaaaatggctcaacatcttcatctcctttgtttccaagg
aggaaatcaaatggggacccatcgtctactcagcctttgataccgcagcagcagcagcag
caacagcagcaagaaatggttccattgcaggacagttacatgcagagtagagcagaagct
cttcaaagtgtcgagtctacaattcatgaattgagcaatatctttacacaactagctact
atggtttcacagcagggagagctagcaatcaggattgatgagaacatggatgacacatta
gccaatgtggaaggagcacaaggtcaactgcttaagtacctcaacagcatatcctctaat
aggtggctgatgatcaagatattctttgttcttatgtttttccttatgatctttctgttt
tttgttgcataa
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