Zingiber officinale (ginger): 121988898
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Entry
121988898 CDS
T08725
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
zof04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121988898
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121988898
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
121988898
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121988898
03036 Chromosome and associated proteins [BR:
zof03036
]
121988898
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121988898
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121988898
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121988898
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B56
TOF-1-like_helical
Motif
Other DBs
NCBI-GeneID:
121988898
NCBI-ProteinID:
XP_042398539
LinkDB
All DBs
Position
6B:complement(110721529..110727156)
Genome browser
AA seq
491 aa
AA seq
DB search
MLNKFMKRGSRKGAKLDAAEPGGNVTVNHASRSAMPSVSPSTGAPVAAAGGGSLNQLPTS
TAGSAATQIESLPLFRDVSVPEQQALFLRKLQICAAAFDFSETLGLARERELKRQTLSEL
VDFVQSGSGRLAESVQEELVRTVTANIFRCLPPRSYENTGSEVTDPEEDDPFLDPAWPHL
QLVYELLLRYIVSSDTDTKVAKRYIDHSFVLHLLDLFESEDPREREYLKTILHRIYGKFM
VHRPFIRKAINNIFYKFIFEIERHSGISELLEILGSIINGFALPMKEEHKLFLVRALIPL
HKPKSVGIYHQQLSYCIVQFVDKDYKLADIVIRGLLKYWPVTNCQKEVLFLGELEEVLEA
TQPAEFQRCMVPLFKQIARCLSSSHFQVAERALFFWNNDHIVSLIAQNRREILPIIYKAL
EMNMEGHWNQAINGLTANVRKMFLDMDSDLFEACQRQYVEKQVKAKSLEEQRDLLWRRLE
AAAGEDMVIIN
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaaattcatgaagcgcggttcccgcaagggcgctaagctggacgcagcagag
cctggcggcaatgtcaccgtcaaccatgcctcccgctccgctatgccctccgtctccccc
tccaccggcgctcctgtcgccgccgccggcggcggcagtctgaatcaactaccaacctcc
actgctggcagcgccgccacgcagatcgagtccctcccgctctttcgcgacgtgtcggtg
cccgagcagcaggcgctgttcctccgcaagctccagatctgcgccgcggcgttcgacttc
tccgagacgctcgggttggcccgtgagagggagctgaagcggcagaccttgtcggagctc
gtcgacttcgtgcagtctggctccggcaggctcgctgaatccgtgcaggaggagctcgtc
cgcaccgtcaccgccaacatcttccgctgcctcccgccgcgttcttacgagaacaccggc
tccgaggtcaccgaccccgaggaggacgatcctttcctagaccctgcttggccacacctt
cagctcgtctatgaactcctcctgcgctacatcgtatcgtcggacaccgacactaaggtt
gccaagcgctacatcgaccactcctttgtgcttcaccttctggacctcttcgaatcggag
gaccctcgcgaacgtgaatatctcaagaccatcctgcaccgcatctacggaaagttcatg
gtacaccgccctttcatccgtaaggccatcaacaatatcttctacaaattcatttttgag
atcgagaggcacagcggcattagtgagctgttggagatacttgggagcataatcaacggc
ttcgcactgcctatgaaggaggaacataagttgttccttgtccgtgcgctcatcccacta
cataagccgaagtcggttgggatataccaccagcagctctcctactgtatagtgcagttt
gtcgataaggattataagctagcagatatagtcattaggggacttttgaagtattggcct
gttactaattgccaaaaggaggtgcttttcctcggggagttagaagaggtattggaggca
actcaacctgcagagttccagcggtgcatggttcccttattcaagcagattgctcgctgt
ctcagcagctctcattttcaggttgcagaaagggctttatttttctggaacaatgatcat
atagtgagcttaatcgcccaaaaccggagggaaatacttcccatcatatacaaagcacta
gagatgaacatggagggccactggaaccaagcgattaacggtcttacagctaatgtccgc
aagatgttcctcgacatggacagtgatctgttcgaggcatgtcaacgccagtatgtagaa
aagcaagtaaaggccaaatccctggaagagcaaagagacttgttgtggagaagactggag
gctgctgcaggagaagacatggttataatcaattag
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