Zingiber officinale (ginger): 121988980
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Entry
121988980 CDS
T08725
Name
(RefSeq) glycine--tRNA ligase, mitochondrial 1-like
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121988980
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
121988980
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
121988980
03029 Mitochondrial biogenesis [BR:
zof03029
]
121988980
Enzymes [BR:
zof01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
121988980
Amino acid related enzymes [BR:
zof01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
121988980
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121988980
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
121988980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
121988980
NCBI-ProteinID:
XP_042398668
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All DBs
Position
6B:113071053..113075143
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AA seq
739 aa
AA seq
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MRFVSHFFATTYISATRSKTLLPVSASLRLLSSAVFATSIPLPMAASEESLRLALTEKQA
AVDAQADAVRNLKARSGTPQAEIEAAVDALNNLKLEAGAAARRLQAALSSNGGSAAGSRE
AFRQAVVNTLERRLFYIPSFKIYRGVAGLYDYGPPGCAVKSNVLAFWRQHFVLEENMLEV
DCPCVTPEIVLKASGHVDKFTDLMVKDEKTGMCYRADHLLKDFCKEKLEKDLTLSSEKVT
EFKHVIAVLDDLSAEQLGAKLKEYGITAPDTKNPLSDPYPFNLMFQTSIGPSGLSPGFMR
PETAQGIFVNFKDLYYYNGKKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDP
DDKSHPKFSDVAELEFLMFPRGEQLAGKSASPMILGKAVSKGIVNNETLGYFIGRVYLFL
THLGIDKDRLRFRQHLPNEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLQAHSEKSG
IPLIAHEIFSEAREVEKLVIVPSKKELGLEFKGDQKMVVEALEAMNEKEAMDMKTTLESK
GEVDFHVCTLGKTVSIKKNMISIGLEKKKEHQRVFTPSVIEPSFGIGRIIYCLFEHSFYT
RPSKAEDEQLNVFSFPPLVAPIKCTVLPLVKIQKFDDVAKVIAKSLTAAGISHIMDTTGT
SIGKRYARTDEIGVPFAITVDSTTSITIRERDSKQQIRVSIDEAALVMKEIIDGQSTWGD
MVWRYPTHSATHAEDELME
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttcgttagccatttcttcgccaccacttacatatccgcaacccgctccaaaacc
cttctcccagtctccgcctctctccgcctcctctcctccgccgtcttcgccacttcgatc
ccgctgccgatggccgcctccgaggaatccctccggctggctttgacagagaagcaggcc
gccgtcgacgcacaggccgacgccgtccggaacctcaaggcccgatccggcaccccgcaa
gcggagatcgaagctgccgttgacgccctcaacaacctgaaactcgaggcaggtgccgcc
gccaggcgcctccaggcggccctctccagcaacggcggcagtgccgctgggagcagggaa
gccttccgacaggccgtcgtcaatactctcgagaggaggcttttctacatcccgtctttc
aagatttaccgtggcgtcgctgggctttacgactacggtccgcccgggtgcgccgtgaag
tccaacgtccttgcgttttggcgtcagcattttgtcctggaggagaatatgttggaggtc
gattgtccctgcgtcactcctgagattgttctcaaggcctctggacatgtggataaattc
actgatctgatggttaaagatgagaagacagggatgtgttaccgtgctgaccatttgctc
aaggacttctgtaaggagaagctggagaaggacctgaccttgtcctcagagaaggtcaca
gagttcaaacatgtcatcgctgtgttggatgatctttctgctgagcaattgggagcaaaa
ctaaaagagtatgggatcacagctcctgataccaagaatccactttctgatccttatcca
ttcaatcttatgttccagacgtccattggcccatcaggcctcagccccggattcatgagg
ccagaaactgcacaggggatctttgtgaatttcaaagacttgtactattacaatgggaaa
aagcttccatttgcagcagctcagattggtcaggcatttagaaatgagatttcacctcgc
caaggtcttctaagagttcgtgaattcactctagctgagattgagcattttgtggatcct
gatgacaaatctcaccctaaatttagtgatgttgctgagcttgagtttttgatgttccca
aggggggagcaacttgcaggaaaatcggcgagcccaatgattctaggcaaagcagtctca
aagggaattgtcaataatgaaacactaggctacttcatcgggagagtgtatctctttttg
acacaccttggaatagacaaagatcgattgcgattcaggcagcaccttccaaatgaaatg
gcgcactatgctgcagactgctgggatgcagagatagagtgttcatatggttggattgaa
tgtgttggaattgccgatagatctgcttatgatttacaggctcattcagaaaaaagtggc
attccactgattgctcatgagatattttcagaagcaagagaagtcgaaaaattagttatt
gtgccatcaaaaaaagaacttggtcttgagtttaagggagatcaaaagatggttgttgaa
gcactggaggctatgaatgaaaaggaagctatggacatgaaaactactttagagtcgaaa
ggggaagtggatttccatgtttgtactctggggaaaactgtctccatcaagaaaaacatg
atctcgattggtttggagaagaagaaggaacatcaaagggtttttacaccttctgtcatc
gagccatcttttggtattgggcggattatatactgccttttcgaacattctttctacacc
agaccaagcaaagcagaggatgagcagctgaatgttttcagttttcctccacttgtggct
cccatcaaatgcactgtcctcccattggtcaagatacaaaagttcgatgatgttgccaaa
gtcattgcaaaatcactaacagcagctgggatatcgcacattatggacacaacaggtacc
tcaataggcaagcgatatgcgaggacagatgagattggtgtaccctttgccataactgtc
gattcgaccaccagcattaccatccgagagcgagatagtaagcagcagattcgtgtaagc
attgacgaggctgctttggtcatgaaagagataatagatggacaaagcacatggggcgac
atggtgtggagatatccaacccattcagctacacatgctgaagacgaattgatggaatag
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