Zingiber officinale (ginger): 121989029
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Entry
121989029 CDS
T08725
Name
(RefSeq) ATP-dependent DNA helicase SRS2-like protein At4g25120 isoform X1
Organism
zof
Zingiber officinale (ginger)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_12
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-GeneID:
121989029
NCBI-ProteinID:
XP_042398758
LinkDB
All DBs
Position
6B:115165955..115186534
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AA seq
1072 aa
AA seq
DB search
MEGAGENNRQVAVNCRLAEQGGSLAFRANKPFLVASKRSRHGLSPSPPSSSSKCRQRVPL
SDITNGCLTPSSGTMIPWKERLDSVVSPAKSILDEDLDEAFLLEVDAICEKRSTVKKERL
GEEVVENKGRVVGGYKDSGSCRQGGLFEDADDESLKLHKYWDYWKNLNDAQREAACSDTS
VPLMIVAGPGSGKTSTMVGRVLTLLKEGIDPSNILAMTFTIAAASEMRDRIGIVAGKAVA
KEIEISTFHSFCLQLCRKHAEKLGRTPDFLIYGPGQQRRAIIEALRLIMTRQKNASETVI
QKLEEVHGTDIANSLKEKSKKWLKFVAQAKASGRTAEDCGINGDETGALILENYDKILAS
CNALDYHDFISSSVKLLTDFPEVYNECLNTWKAIVIDEFQDTSSMQYCLLKILASHNRVT
IVGDEDQSIFSFNGADACGFDSFRRDFPTVKEVRLKKNYRSTKCIVEAASSLIQNNNKRC
CIKQIETDNSCGSKVTIKECHNEDAQCAFVIDKILEMTSHDSNADVSFGNVAILYRRQVS
GKAFQACLRDRKIPFNTHGVAFYRKKVIKAIMALLRTTLPDCDDGPFRLAFKALFPGDNE
EKKLVVDYVERISSARKCSFLAAAKDIFHAKVSGTFKRYQLTQGRKVLFSLDMISTLVRR
ESSISMVISSAANMLPQKYLLEKRAIVDAEGGKFLNEDNDLRSVVQYLMDDVSDFLSMHF
TNSEDQNISKEEGCRSILKSFIDFITLRETENFRSRRQENKNSVTLTTIHQSKGLEWDVV
FIVKLLVLCSGNWTYKDIFKLGVYIANDNEIPLLHEYNGVHQGATTLEEERRLLYVAMTR
ARKKLYIVYVIMDSSWQLLQPSRFLNEIPDRLLETQSEAVSRDLVISNKIISNSMGLETS
DEKVHGDVKKIDDISSCFKGITDIALNNSFLKRFNMEDRSIVSFLFHQWGKRPAFQHPSR
LVDKISFVIDERLRNKTYKHKDVMRILKSCLKDDDAISYAQYVIKWEQIPAGLRVHLNRE
KQEHFQKQRIENSMGSSKATPKQIAYLHSLGCTISPSSRLHASRLIEQYKSL
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgccggcgaaaacaatcgccaagtcgccgtcaactgcagattggccgagcaa
ggcggttcgctcgccttccgtgcgaacaaacccttcctcgtcgctagcaagagatcccgc
catggactctccccttcgcctccctcttcctcctccaaatgccgccaaagggttccgctt
tctgacattacaaacggctgcttgactccgtcttccggaaccatgataccttggaaagaa
cgtctggattccgttgtatctccagcaaaaagcattcttgatgaggatcttgacgaggcg
tttctcctcgaggtggacgccatatgtgaaaagaggtcaacagtgaagaaggaaaggtta
ggcgaggaggtggtggaaaataagggacgtgtagtgggcggatataaggactcgggttca
tgtaggcaggggggtttattcgaggacgctgatgatgagtctttgaagctgcataagtac
tgggattattggaaaaatcttaatgatgcgcagagggaagctgcctgcagtgacacttca
gtcccattgatgattgttgctggcccaggaagtggaaagacatccacaatggttgggcgc
gtgctgacactgctcaaagagggaattgatccatccaacatcctagcaatgactttcaca
attgctgctgcatcagagatgagggatcgaattggaatagtagctggaaaagcagttgca
aaagaaattgaaatcagcacatttcactcattttgtttgcagctttgcaggaaacatgca
gaaaaattgggacgtacacctgacttcctaatatatggacctgggcaacaaagacgggct
atcattgaggcattgcgtttgataatgactcgccaaaaaaatgcatcagaaacagtaatc
cagaagcttgaagaagttcatggtactgatattgctaactctttgaaggaaaagtccaag
aagtggctaaagtttgttgcacaggctaaggcctctggcagaacagctgaagactgtggt
ataaatggtgatgaaactggtgctttgatccttgaaaactatgacaagattcttgcctct
tgcaatgctttggattatcatgatttcattagctcatctgtgaagttacttactgatttc
cctgaagtttacaatgagtgtttgaacacttggaaggcaattgttatagatgaatttcag
gatacaagttcaatgcagtattgccttttaaagattttagcttctcataatcgtgtaaca
attgttggcgatgaagatcagtccatattcagttttaatggtgctgatgcttgtggtttt
gactcctttcgaagagactttcctactgtcaaagaggttagattaaagaagaattatcgc
tctaccaaatgcattgttgaggcagcttcttctctcatacagaacaataataaacgttgc
tgtattaaacaaattgagactgataattcctgcggaagcaaggttactattaaggaatgc
cacaacgaagatgctcaatgtgcatttgtcattgacaaaattttagagatgacatcacat
gactcaaatgctgacgtctcctttggcaatgttgcgattctttaccggagacaagtctct
ggaaaagcattccaagcatgtttgcgagacaggaaaataccttttaatactcatggggtt
gccttttatcggaaaaaggtaataaaagctattatggcattactgagaacaacattgcct
gattgtgatgatggcccatttcgacttgccttcaaggcactttttcctggtgataacgaa
gaaaagaaattggttgttgattatgttgaaaggatttcctcagcaagaaaatgtagcttt
ttggcagctgcaaaagacatttttcatgcaaaagtttctggtactttcaaaaggtatcaa
cttactcaaggacgcaaagtattattttcacttgatatgatctccacgcttgtaagaaga
gaaagttcaatctcaatggtcatctcttctgcagcaaatatgttacctcagaaatatctt
cttgaaaagcgtgcgatagttgatgcagaaggtgggaagtttttgaatgaggacaatgac
ctaagatcagtagttcaatatttgatggatgatgtgtcagatttcttgtccatgcatttt
actaattcagaggatcaaaacattagcaaagaagaaggttgtcgaagcatactcaagtcc
ttcattgacttcataactttgagagaaacagaaaattttcgatctcgtaggcaagaaaat
aaaaactctgttacattgacaactattcaccagtcaaaaggtctagaatgggatgttgtt
ttcatcgtgaagctgcttgttctgtgttcagggaactggacatacaaggacattttcaag
ttgggtgtatatattgccaatgataatgaaattcctttgcttcatgaatataatggtgtt
caccaaggtgcaacaactcttgaggaggagcgtaggcttctatatgttgcaatgactcgt
gctcgaaagaagttgtatattgtgtatgtcatcatggattccagttggcagttactccaa
ccttcacgttttcttaacgaaattccagatcgtcttctcgagacacagagtgaggcagtt
tccagagatttggtaatttcaaataaaattatttctaattcaatgggactagaaacatca
gatgagaaggttcatggagatgttaagaaaattgatgatatctccagttgtttcaaaggg
ataactgacatagccttgaacaatagttttctgaagaggttcaacatggaagacagatcc
attgtgtcatttttatttcatcaatggggaaaacggcctgcatttcaacatcctagccgg
ttggttgataagatcagttttgtcattgatgaacgtttaaggaacaagacatacaaacat
aaggatgttatgagaattctcaaatcttgcttgaaagatgatgatgcaatcagttatgca
caatacgtgataaagtgggaacaaattcctgctggacttcgagtacatttaaatagagaa
aaacaggaacacttccaaaagcaaagaatcgagaactctatgggttcatccaaagccacg
cctaaacagattgcttatctacatagtttggggtgcaccattagtccttcctcgcgcctt
cacgcctcacgtctgatagaacaatataaatccttgtga
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