Zingiber officinale (ginger): 121989031
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Entry
121989031 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase hel2-like
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121989031
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121989031
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121989031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
23S_rRNA_IVP
Motif
Other DBs
NCBI-GeneID:
121989031
NCBI-ProteinID:
XP_042398768
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All DBs
Position
1B:complement(165756491..165761755)
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AA seq
832 aa
AA seq
DB search
MDDSCAVCADPLEWVAYGPCGHREVCSTCVVRLRFVLGDRRCCICKTECPIIFVTKALGD
YTRVVADFSVFLTGATEGKTGQYWYHEDTQAYFDDADHYKMIKAMCRLSCSICDNNSESQ
GGESTKRRTRFRSIEQLNGHLRHQHNLFMCNLCLEGRKVFICEQKLYTRSQLNQHKSTGD
SEVDGTESERGGFMGHPMCEFCRNRFYGDNELYLHMSTEHYTCHICQRQHPGQYDYFRDY
NDLEMHFRQEHFLCENEACLEKKFIVFQTEAEMKRHNALEHGGNMSRSMRNAALRIPTSF
RYRRNEQEQRRGRGRGFRQNSSGDQLAMAIQASLETAADADGRFQDSSFGAHSDSENRRM
RRVDTGTGSSEVSTVHEGQEGPLNQSTRTTPILEESSFPPLSDRELPEPSSRYAQALSQS
SRNPAKLGEESFPPLPGVTNKAKPTHGSEGLSTNTLAARLQRKRDSVVINSAPARPLEYH
EMFPSASQLRTTPNHGITASTFSSSQPRAPTRENLFISPSPASSSVNSDAANRMKHSASV
PNLTSGTFSSQVVPIVKREESSTSSNQSHTSTNDVYAVNKSMVEQIRASLGMDEDKYSAF
KSISLEYRQDLINTLEYLSYVEQFGLSHLVLELAHLCPDARKQKELIDAYNLNLRNKTLQ
ENAGISDGRKGKGKTSARAKSKANNTLSDNFLDTVKKLQLNQKAQEEEVLHKDGYHASKD
QPRSSGAANSGAIDVNFIETSVDREPQSVTVMTKQNLADGGSSKQRKKTSKFNRIRLGDG
SAAALFDPSRRDAIPEPQENGNADGSSETQPVRGVWRSGGAQRLFANSSKNA
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggacgatagctgtgcggtttgcgccgatcccctcgagtgggttgcctacgggccatgt
ggccaccgggaggtctgctccacctgtgtcgtgcgcctccgattcgtgctcggcgatcgc
cgttgttgtatctgcaagaccgagtgcccaattatctttgtcaccaaggctcttggagat
tatactagagtggtagctgacttttcagttttcttaactggagcaactgaagggaaaact
ggacaatattggtaccatgaagacacgcaagcttactttgacgatgctgaccattacaag
atgataaaagcaatgtgtcggctttcctgtagcatctgtgacaataattctgagagtcaa
ggtggcgagagcacaaagaggaggacaagatttaggagcatagaacaattaaatggtcat
ttgaggcatcagcacaacttattcatgtgcaatctatgcttggaaggaagaaaggtattt
atttgcgaacaaaagctatacacaagatcacaactaaatcaacacaagagcactggggac
tctgaggtagatggcactgagagtgaacgcggtgggtttatggggcaccccatgtgcgag
ttttgcagaaatcgattctatggagataatgaactttatctgcacatgtcaacagaacac
tatacctgccatatatgtcaacgacaacatccaggacaatatgattatttcagagattat
aatgacttggagatgcatttccgccaggagcatttcctctgtgaaaatgaggcatgttta
gaaaagaagttcattgtttttcaaactgaagcagagatgaagaggcataatgctcttgag
catggggggaacatgtcgcgttcaatgcgaaatgcagcacttagaataccaacaagcttc
aggtatcggaggaatgaacaagagcagcgccgaggaagaggtcgtggattccgccaaaat
tcttctggtgatcagctggctatggcaatacaagctagccttgaaacagcagcagatgct
gatggtagatttcaggattcttcttttggtgctcattcagacagtgagaataggaggatg
aggcgtgtcgatacaggtactggttcatcagaggtctcaactgtccatgaaggtcaagaa
ggacctttgaaccaaagcactaggacaactccgatactagaagaatcctccttccctcct
ctttctgatagagaactaccagagccatcttctagatatgctcaggctcttagtcaaagt
tccagaaatccggccaaactcggggaagaatcatttcctcctctacctggtgtgactaat
aaggctaagcctactcatggatcagaaggtttgtccacaaatacccttgctgcccgcctc
caacggaagagagactctgttgtgattaactctgctccagcaaggccactagagtatcat
gagatgttcccatctgcttctcaattgaggaccactccaaatcatggcatcacagcatca
actttctcaagttctcaaccacgagcccctacaagagaaaacctatttatatcaccttca
cctgctagttcttctgttaattcagacgctgctaataggatgaagcattcagcatcagtt
cccaacctaacctctgggactttttcaagccaagttgttcctattgtcaagagagaggaa
tcatcaacttcaagcaaccaatctcatacttccacaaatgatgtttatgctgttaacaaa
tccatggtagaacagattcgagctagcttaggtatggacgaggataaatatagtgcattc
aaaagcatatcattagagtatcgtcaagatctgatcaatacattggagtatctttcttat
gttgagcaatttggcctgtcacatcttgttcttgaacttgctcatctctgtcccgatgct
cggaagcagaaggaattaattgatgcttataatctgaatttacggaacaaaactctgcaa
gaaaatgccggcattagtgatggcagaaaaggcaagggaaaaacttctgcccgagctaaa
agtaaggctaataatacattatctgataactttttggacacagtaaagaagttacaattg
aatcagaaggctcaagaagaagaggtacttcataaggatggctaccacgcttctaaggat
caacctcgttcatcaggagccgccaactctggcgcaattgatgtgaatttcatcgaaact
agtgtcgacagggaaccacaatctgttacggtcatgacaaagcagaatttggctgatggt
gggagcagtaagcaacgcaagaagacatcaaagtttaataggatacgcctgggcgatggt
tcagcagctgcactttttgatccttctcgcagggatgctattcctgaaccacaagagaac
ggaaatgctgatggttcttctgaaacccaaccagtccggggtgtttggcgaagtggtggc
gcacaaagactttttgctaactctagtaagaatgcctga
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