Zingiber officinale (ginger): 121989185
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Entry
121989185 CDS
T08725
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like
KO
K03267
peptide chain release factor subunit 3
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121989185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121989185
03012 Translation factors [BR:
zof03012
]
121989185
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
121989185
Translation factors [BR:
zof03012
]
Eukaryotic type
Release factors
121989185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
EF-G_D2
G-alpha
Motif
Other DBs
NCBI-GeneID:
121989185
NCBI-ProteinID:
XP_042399003
LinkDB
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Position
1B:166008285..166033567
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AA seq
536 aa
AA seq
DB search
MEHELPAEALPHPPSVVEDGATDDWSKEDDDPMAEDHPQPSAAVTDLVDPHLEDTKADIQ
SGLQSLQLETGVKDKKAITDENAEGLDDKEENKKRHFNVVFIGHVDAGKSTAGGQILLLS
GQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGITVEVGRAHFETENTRFTILD
APGHKSYVPNMISGASQADVGVLVISARKGEFETGYEKGGQTREHVQLAKTLGVSKLVVV
VNKMDDPTVKWSKERFHEIESKMVPFLKSSGYNVKKDVQFLPISALFGANMKTRMEKSIC
DWWSGPCLFEVLDSIEVPPRDPNGPVRMPIIDKYKDMGTVVMGKIESGSISEGDNLLVMP
NKASVKVLSIICDENKVRRAGPGENVRVKLAGVEEEDILAGFVLSSVAKPIGAVSEFNAQ
LQILELLDNAIFTAGYKAVLHIHSIVEECEVVELLEEIDTKKKKDADPRKKKAKRKPLFV
KNGAVVVCRIQVTNLICIESFSDFAQLGRFTLRTEGKTVAVGKVVALPPAGSPAFA
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgaattgccggcggaggcccttccgcacccgccttccgtagtcgaagacggt
gctaccgacgattggagcaaggaggacgatgatcctatggcggaggaccaccctcagcct
tcagctgccgtcactgacctggtggatcctcatctcgaagatacaaaagcagatattcag
tctggccttcagtcattacagctggaaacaggagttaaagataagaaggcaattacagat
gagaatgctgaaggacttgatgacaaagaagaaaacaagaagagacactttaatgttgtc
ttcattggtcatgttgatgctggtaagtcaacagctggtggtcaaatacttttacttagt
ggtcaagttgacgaccgaacaattcagaagtatgaaaaggaggccaaagataaaagtcga
gagagttggtacatggcttatattatggacaccaatgaggaggagcgtgttaagggaata
actgtcgaggttggtagagcgcattttgaaacagagaatacaaggtttacaattttggat
gcaccgggccataaaagttatgttcctaacatgataagtggtgcatctcaagcagatgtt
ggcgttttggtaatatctgctcggaaaggtgaatttgaaactgggtatgagaaaggagga
caaactcgtgagcacgtccagcttgcaaagacattaggtgtttctaaattggttgtcgtt
gtcaacaaaatggatgatccaactgtgaaatggtccaaagaaaggtttcatgaaatagag
tccaagatggtgccttttctcaaatcctctggttacaatgtaaagaaagatgttcagttt
cttcctatctctgctttgtttggtgcaaacatgaaaaccagaatggagaaaagcatttgt
gattggtggtctggaccttgcctctttgaagtacttgattccattgaagttcctccacgc
gatcctaatggtcctgttagaatgccaattattgacaagtacaaagacatgggaactgta
gtgatggggaaaattgagtcaggaagcatcagtgaaggagacaatttattagtaatgcca
aataaagctagtgttaaagtactttctataatctgtgatgaaaataaagtcagaagagct
gggcctggtgagaatgtcagagtgaaattggcaggtgttgaagaagaggatattttagct
ggttttgttctttcaagtgttgcaaaacctataggtgctgtctctgaatttaatgctcag
ttgcagattcttgaattgcttgacaatgcaatttttactgctggatacaaggcagttttg
cacattcattcaattgttgaggagtgtgaggttgtagaacttctcgaggaaattgataca
aagaaaaaaaaagatgcagatcctagaaagaagaaggccaagaggaagccactttttgtt
aagaatggtgctgttgttgtctgccgcattcaggtaaccaacttaatatgtattgaaagc
ttttctgattttgctcaacttgggaggttcacgcttcgtactgaaggaaaaacagtagca
gttgggaaagtagttgcccttccaccagcaggaagcccagcatttgcatag
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