Zingiber officinale (ginger): 121989246
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Entry
121989246 CDS
T08725
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
121989246
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
90S particles
Other 90S particles
121989246
Pre-60S particles
Other pre-60S particles
121989246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
Peptidase_M90
Motif
Other DBs
NCBI-GeneID:
121989246
NCBI-ProteinID:
XP_042399096
LinkDB
All DBs
Position
6B:118982451..118992772
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AA seq
1289 aa
AA seq
DB search
MEPEAMESDVVFLSGDDETAALDRDDLAVGVLSRFQSSSNDDRQHLCATVGAMAQALKDQ
GIPHTPVAYFGATVSSLDRLSRHSASGSDPATASLLSFLAIAFPKVPRPVVRSRWKEVSE
TLIRVLGFDSLQPSGVKSGLRCASYLLAVGDKANWSDLSPLYDSLIGFMTDQHQKVRKEC
HTCMSDVLRNFQHHPVLLIASEVITSNFERYLLLAGGSYEDSAPSEGPKGAMLVLYILNA
LKVCLPLMAMKYTNTILKYCKKLLELQQPIVTRCIMEVLYAHCSSPTARVSPELLQDLLC
SLALTVPEEKSADYMASTARLLHFGTRKVYDLNKEICIVKLPIIFNSLGDILASDHEEAI
FAAMEALKGLLCACIDENLCKQGTDQIKNTDGGSRKSGPTIIEKLCATIEGFLGYRYDAI
CDISFQILSTTFSQLGESSYYLMVGAVKSLVDMQNLSDEDFSFRKQLHECLGSAIRAMGP
EKFLTIVPLNLDVEVASDANVWLFPILKQHVVGSSLIFFSEYILGIVKRLKQKSLELEKE
GRVFSARNAEGLIYALWSLLPAFCNYPVDVNKGFKAIQKDLCNALLEEPELRGIICCSLQ
TLIRQNNDIISSTTSEPDAEVSHFRAEENRYKYNKQQAEENLKAIKSYASEFFSVLSEMF
LKSPKDIGGCLQATIHDLASISDKRIVKNLFNAISQQLLKVTQEAIKAKQLHNSDETLDN
LSNEASLCHARALLLDLASSLLPGLDDTEIYSLLKAIEPAFQDEEGILQKKAYKILSVIL
KERYHILSDNLDEVLQLMIVSLPCCHFAAKRHRLDCLYILIVHISKDLFDHKRRDLISSF
LTEIMLSLKEANKKTRNKAYDLLVEIGHVCVDEEKGGRQENLLQFFNLIAGGLAGETPQM
ISAAIKGLARLAYEFQDLVVVAFNLLPSTFLLLQRKNREIVKANLGFVKVLVAKSKADGL
HMHLKTMVDGLLKWRDDTKNHFKAKVKLLIEMLVKKCGFDAVKAVIPEEHMKLLTNIRKI
KERKERKSNSEADDESLVSRTTMSRHSKWNHTRIFSDFGDEDSDDHAGEQAMTKTIGRQT
KASRPGTGISSVRSSRKRSTVKSLPEDLLDQLDGDPLDLLDCENTRSALRSSNQLKRKQS
SIEMPEFDADGRLIIHEDGYKPKKDRVVSNDEAATRSRTDARSLPTSSSKCQKKRQKTSD
SGWAYTGNEYTSKKAGGDFKKKDKLEPYAYWPLDRNLLNRRKERRAIARKGMVRIMKVTK
KLEGKNVSAALSLNRAPSFKTKQKKVGKR
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atggaaccggaggcgatggagtccgatgttgttttcctttccggtgacgatgagaccgcc
gccttggacagggacgaccttgctgtcggcgtactgtcccgctttcaatcctcttccaac
gacgaccgccagcacctttgcgccacggtcggcgccatggctcaggcactcaaggaccag
ggcatcccgcacactcccgttgcctacttcggcgccaccgtatcctcccttgaccggctt
tcccgccactccgcctctggctccgaccctgccaccgcttccctgctatccttcctcgcc
atcgcgttccccaaggttcctcgtcccgtcgtcaggagtagatggaaggaggtgtctgaa
actttgattagggtgctagggtttgattcactacagccttccggcgtcaaatctgggctg
cgttgtgcttcttatttactcgcagttggagataaggcgaattggtcggacttgtcacct
ctttacgattctcttataggttttatgacggatcaacaccagaaggtaagaaaggagtgc
catacatgcatgagtgatgtgctgagaaatttccagcatcatcctgttttacttatagca
agtgaggttataacctccaactttgagagatatctactacttgctggtggatcttatgag
gattcagctccttcagagggccctaaaggtgctatgctggtcctgtatatcttaaatgct
ttgaaggtctgccttccccttatggcaatgaagtacacaaataccattttgaaatactgc
aaaaaacttttggagctgcagcagccgattgtaacaagatgcataatggaggttctttat
gcccattgcagcagtccaactgctagggtttctccagaattgctacaagatttattgtgc
tcactagccctgactgttcctgaagaaaagtctgcagattatatggcatcaacagcacgt
ttattacactttggtacaagaaaagtttatgatctaaacaaggagatctgcattgtgaaa
cttcctattatattcaattctcttggagatattttagccagcgatcacgaggaagctata
tttgctgctatggaagccttgaagggtttattatgtgcttgcattgatgaaaacctgtgc
aagcaaggtaccgatcagataaaaaatactgatggagggtctaggaaatctggacctact
atcattgagaaactatgtgctactatagaaggttttcttggataccgttatgatgctatt
tgcgacatttcatttcagattctctcgacaacattcagtcaactaggagaatcatcttac
tatctaatggttggagctgttaaaagccttgtagatatgcaaaatttatcagatgaggac
ttctcttttagaaagcagcttcatgagtgtcttggatcagctattagggccatggggcct
gaaaaatttcttaccattgtgcctcttaacttggacgtggaagttgcctcagacgccaat
gtttggctatttccaatattgaagcaacatgtggttggatcaagcctgatctttttctca
gaatacatattgggtattgttaaacgtttgaagcaaaaatcccttgagcttgagaaggag
ggaagggtcttttcagcaagaaatgcagaaggtcttatatacgcattatggtccttgcta
ccagccttttgcaactatcctgttgacgttaacaaaggttttaaagctattcagaaggat
ttgtgcaatgcactccttgaagaacctgagttgcgtggaataatatgttgcagccttcag
actttgattcgtcagaacaatgacataatttcaagtacaacctctgaacctgatgctgaa
gtaagccactttagagcagaagagaatcgctataagtataataaacaacaagcagaagaa
aatctgaaggcaataaaatcatatgcttcagagtttttttcagttttatcagagatgttt
ttgaaatctcccaaggatatcggtggctgcttgcaggctaccatccatgatcttgcatcc
atatcagacaaaaggatcgtgaagaacttattcaatgctattagtcagcaactgttgaag
gttactcaagaagctattaaagcaaaacagttacataattctgatgaaactctagataat
ttatcaaatgaagcatcactatgccatgcaagggccctcctattggacttggcatcttca
cttctgcctggactggatgatacagagatttactcgttgctcaaggctattgagcctgct
ttccaggatgaagaagggattctacagaaaaaagcatataaaattctctcagttatactg
aaggaacgttatcacattctttcagataatttggatgaagtgctacagttgatgattgtt
tcactgccttgctgtcactttgcagctaaacgccatagacttgattgcttgtatattttg
attgtccatatatcaaaggatttatttgatcataagaggagggacctaattagctctttt
ctcactgaaataatgctttcgttgaaagaggcaaataaaaagacaagaaacaaggcttat
gacttgcttgttgaaataggccatgtatgtgtagacgaggaaaaggggggaagacaagaa
aacctcttacaattttttaacttgattgctggtggtcttgctggtgaaacaccacaaatg
atcagtgctgcaataaaagggttagctcgtttggcatatgaatttcaagaccttgttgtt
gtagctttcaacttgcttccctccacatttcttctcctgcaaaggaagaaccgtgagatt
gtcaaagcaaatttaggttttgtcaaggtattggtggcaaaatctaaagccgatggcttg
catatgcacttaaagacaatggttgatggacttctgaaatggcgcgatgacaccaagaat
catttcaaggctaaggttaagttactgattgaaatgcttgtgaaaaaatgtggctttgat
gctgtgaaagcagttatacctgaagaacacatgaaactactaacaaacattcggaagatt
aaagagagaaaggagcggaaatccaattctgaagctgatgatgaatctcttgtatccaga
acaaccatgtcgagacacagtaaatggaatcatactcgtatcttttctgattttggagat
gaagattcggatgaccatgctggtgaacaagcaatgacaaaaacaattggtcggcagaca
aaagcttctcgtcctggcacaggcatttcgtctgtaaggtcaagccgaaaacgctcaaca
gttaagagcttgccagaagatttgctcgatcagttggatggtgatccactcgatcttcta
gattgcgaaaatacaagatcagcactacgatcctcaaatcaactcaaaagaaaacaatcc
tccattgaaatgccagaatttgatgctgatggtcgccttatcatccatgaagatggttac
aaacctaaaaaggatagagttgtttcaaatgatgaggcagctacaagaagccgcacagat
gctcgctctttgccaacatcgtcatcaaaatgtcagaaaaagcgacagaagacttcagat
tctggttgggcctacactggcaacgagtataccagcaaaaaggctggtggtgatttcaag
aagaaggacaagctggaaccctatgcatattggccgcttgatagaaatttgctaaatcgg
aggaaggagaggagggctatcgcccggaagggtatggtgaggataatgaaagttacaaag
aagctcgaagggaagaacgtatctgctgcactctctttgaacagagcaccgtcgttcaaa
actaaacaaaagaaggttgggaagaggtaa
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integrated database retrieval system
