Zingiber officinale (ginger): 121989266
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Entry
121989266 CDS
T08725
Name
(RefSeq) transcription factor E2FB-like isoform X1
KO
K06620
transcription factor E2F3
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
121989266
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
121989266
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GFIT
Motif
Pfam:
E2F_CC-MB
E2F_TDP
Leu_zip
TrmB
Pkinase_C
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
121989266
NCBI-ProteinID:
XP_042399121
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Position
6B:complement(119356983..119367074)
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AA seq
491 aa
AA seq
DB search
MTGGEEAGNRSEQQLAQIFKPPKQYLLISSSKPPFCSPDEYHRFDSLQGSNDEMVDALVL
QTPLKRKSVQEDNDIINVSEWTTSPQYSVGVTSPLLTPVSEKGRKTNNRSKVAKHNKLEA
LTPVSNIGLPSGDNLTPVGTCRYDSSLGLLTKKFINLLKHSQDGILDLNKAAEILKVQKR
RIYDITNVLEGIGLIEKKFKNRICWKGVDDLDPVEVHGDVSLLQAEIEKLTFEERKLDDL
ISQMREKLREFTEEENNQKYVFSFIQTIDYYWPIVMHKQLFFPSRWLFVTEDDIKGLPCF
QNVTLIAIKAPHGTTLEVPDPDEAGEYLHRRYRIVLRSTMGPVDVYLVSQFEEKFDELSD
MNTPPKLPPASNSSSVDNSIVPCNAEESIGIGMDVDIQQNERIWFDLNSSQDFSGGMMKI
VPSEIDTEADYWLLSDADVSITDMWKTAPEVQWDSMPRFNACDFITDGASTPIPRTPSGV
EITADANSSQR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtggggaggaagctgggaaccgatcggaacagcagctggcgcagatcttcaag
ccgccgaagcagtacttgctgatttcctcatcaaaaccacctttttgttctcctgatgag
taccacaggttcgacagcctgcaagggtccaatgacgagatggtcgatgccctagtctta
caaactcctttgaagcgaaagtctgtgcaagaagataatgacattataaatgtaagtgaa
tggacaaccagcccacaatattctgtaggagttactagtcctctactcacaccagtatct
gagaaaggaaggaagacaaacaataggtccaaggttgcaaaacacaataagcttgaagct
ctaactcctgtatcaaatattggcttaccttcaggtgataatcttactccagttggtact
tgccgctatgatagctccttagggcttttgaccaaaaagtttatcaacttgctgaaacac
tcacaagatggcatcctcgatttaaataaagctgcggaaatattgaaggtacaaaagagg
aggatttatgatatcactaacgttcttgaaggcattgggcttatagaaaagaaatttaaa
aacagaatctgttggaagggtgtagatgacttggatccagttgaggttcatggtgatgtt
tcattattacaggctgaaattgagaaacttacatttgaggagaggaaattagatgatctt
atcagccaaatgagagaaaaattgagggagtttactgaggaagaaaataatcaaaagtac
gttttctcattcattcaaacaatagattactattggccaattgtcatgcacaagcaactt
ttttttccctctaggtggctctttgttactgaagatgatatcaaaggccttccatgcttt
cagaatgtaaccttaattgcaattaaagctcctcatggtactaccctagaagttcctgat
cctgatgaggctggagaatatctccataggagatataggattgtcttaagaagcactatg
ggtcctgtagatgtttatcttgtgagtcaatttgaagagaagtttgatgagttgagtgac
atgaatacaccgccaaagctccctcctgcatcaaattcaagttctgttgacaactctatt
gtcccttgtaatgctgaagagagcattgggattggaatggatgttgatattcaacaaaat
gagaggatatggtttgatttgaactcttcacaggattttagtggtggcatgatgaagatt
gttccttcagagattgatactgaagctgattattggcttttatcagatgcagatgttagc
atcactgatatgtggaaaactgcaccagaggttcaatgggatagcatgccaagattcaat
gcatgtgattttattacagatggcgctagcactcctataccacgaactccatcaggagtt
gagatcactgcagatgcaaattcctcccagagatga
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