Zingiber officinale (ginger): 121989297
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Entry
121989297 CDS
T08725
Name
(RefSeq) homeobox-leucine zipper protein ROC5-like
KO
K09338
homeobox-leucine zipper protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
121989297
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
121989297
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Homez
Motif
Other DBs
NCBI-GeneID:
121989297
NCBI-ProteinID:
XP_042399177
LinkDB
All DBs
Position
6B:121306631..121311274
Genome browser
AA seq
808 aa
AA seq
DB search
MSFGGLFGGGGSGSAGRIGMTTDFSHRTSAVISQPLLDSSSVYKPLFPSSGLSLALLANM
EGQSGDRANRTRTSGKAGGGELESSLRRNKEDENESRSGGSDNLGGVSGDDLDLEQENPR
KKKRYHRHTPQQIQELEGFFKECPHPDEKQRLDLSKRLSLETRQVKFWFQNRRTQMKTQM
ERHENTILRQENDKLRSENLSIKEAMRNPICNNCGSLSLLGEVSLEEQHLRVENARLKDE
LDRVCSLISKFIGKPLSSSTTQIALPMPSSALELAVGSKSFASLSSMVSATLSSVIDFTA
GASSPLGSVITPVRSVVVGGVDRSQERLVFLELALTAMDELVKMAQMEEPLWISSLDGGR
ETLNYEEYHQNFPRCIGAKPIGFVSEATRSSCVVIINTLALVETLMDANRWADMFPSVIA
KTTTADVISAGMGGSRNGALQLMHAELQVLSPLVPVRKVQFLRFCKQLADGAWAVVDVSF
DGARDNCPGDSMGCCRRLPSGCVVQEMPNGYSKVTWVEHAEYDEAAVHPLFRPVLSSGMA
LGAPRWIAALQRQCQSLGVLMSSPSTDGANTITQSGRRSMVKLAQRMTDNFCAGVCSSSA
HEWNKLRGGVHIGQDVRVMTRQSVADPGEPPGVVLSAATSVWLPATPQQLFDFLRNEQLR
SQWDILSNGGPMQEMAHIAKGPDSGNAVSLLRASAVSADQSSMLILQETCTDASGSLVVY
APVDVPAMQLVMSGGDSSYVALLPSGFAILPDGDVGKAGGGSLLTVAFQILVNSLQPTAK
LTVESVETVNNLISCTVQKIKAALNCDA
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgagttttggaggtttgttcggcggcggtggcagcggcagcgccggccgaatagggatg
actactgatttctctcatcgcacatccgccgtcatttcccagccactcctcgactcttct
tccgtctacaagccactgttcccttcctctggcctctcgctcgccctgcttgcgaacatg
gaaggccaaagcggcgacagggcgaaccggactcgcacatctggaaaagctggtggaggc
gagctggagtcgtcactgcgtcggaacaaggaagacgagaatgagagcaggtccggagga
agcgataatttgggaggcgtctccggagatgacttggatttggagcaggagaatccccgc
aagaagaagcgataccatcgccacacccctcagcaaatccaagaactcgaagggttcttc
aaagaatgccctcatcctgatgagaaacaaaggttggacctaagcaagaggctgtctttg
gagactcgccaggtcaagttttggttccagaatcgtcgaacgcagatgaaaactcagatg
gagaggcacgagaacacgattcttcggcaggagaacgacaagctccgctctgagaattta
tcgatcaaggaggcgatgaggaatcccatctgcaacaactgcggcagcctgtccttgctc
ggcgaagtgtctctcgaagagcagcacttgagggtagagaacgcccggctgaaggatgag
ctcgatcgcgtttgctccctcatcagtaagttcatcggcaaacctctttcctcttccacc
acgcagatcgctctccccatgccgagctccgccctggagctcgccgtcgggtccaaatct
ttcgccagtttgagctccatggtctccgcgaccttgtcgtccgtcatcgatttcaccgca
ggagcgtcgagccctctcggctccgtcataactcccgtgaggagcgtggttgtgggagga
gtggatcgatcgcaggagaggcttgtgttcttggagctcgcactgacggcgatggatgag
ctggtaaagatggcccagatggaggagcctctttggatttcgagcttggatggaggcagg
gagacgttgaactacgaggagtaccaccaaaatttccctcgctgcatcggcgccaagccc
attgggttcgtgtccgaggcgactaggtctagctgcgtcgtcatcatcaataccttggca
ctggtcgagacactcatggacgcaaatcggtgggcagatatgttcccttcggtgatcgca
aagaccaccaccgcggatgtgatctcagccggaatgggtggcagcagaaatggcgcattg
caactcatgcatgcggagcttcaggttctgtcaccgcttgtgcctgtccgaaaagtccag
ttccttaggttctgtaagcagctcgcggacggagcttgggctgtggtggacgtctccttt
gatggggctagagacaactgccccggcgacagcatgggttgctgccgcaggctgccttct
ggttgcgtggtgcaagagatgcccaacggttattctaaggtcacgtgggtggagcatgca
gaatacgacgaggcggcggtgcacccgctcttccgtccggtgctaagctccggcatggcg
ctgggggctccccgttggatcgctgccctgcaacgccagtgtcagtccttgggcgtcctc
atgtcctccccatcaacggacggcgccaacacgataacccagagcggacggcggagcatg
gtgaaactggcgcagcgcatgacggacaacttctgcgccggggtgtgctcgtcgtcggcg
cacgagtggaacaagctgcgcgggggcgtccacatcggccaggacgtccgagtgatgacg
cggcagagcgtggcggacccaggcgagccaccgggcgtggtgctgagcgccgccacctcg
gtgtggctccccgctacgccacagcagctcttcgacttcctccgcaacgagcagcttcgg
agccagtgggacatcctctccaatggcggcccgatgcaggagatggctcacattgctaag
gggccggactccggcaacgccgtctccctcctccgcgccagcgcggtgagcgcggaccaa
agcagcatgctgatattgcaggagacgtgcacggacgcgtcggggtcgctggtggtgtac
gccccggtggacgtgccggcgatgcaactagtgatgagcggcggcgactcctcctacgtc
gcccttttgccgtcgggcttcgccatcctgcccgacggcgacgtgggtaaggcgggggga
gggtcgctgctgacggtggcgttccagatcctggtgaacagcctgcagccgacggcgaag
ttgacggtggagtcggtggagactgtcaacaacctaatctcctgtacggtgcaaaagatc
aaggcggccctcaactgcgatgcttga
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