KEGG   Zingiber officinale (ginger): 121989434
Entry
121989434         CDS       T08725                                 
Name
(RefSeq) U2 small nuclear ribonucleoprotein B''-like
  KO
K11094  U2 small nuclear ribonucleoprotein B''
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121989434
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zof03041]
    121989434
Spliceosome [BR:zof03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    121989434
 Complex B
    121989434
 Complex C
   U2 SnRNP specific factors
    121989434
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_SRRT DUF6445 xRRM DUF4523 RRM_PARP14_3
Other DBs
NCBI-GeneID: 121989434
NCBI-ProteinID: XP_042399429
LinkDB
Position
6B:complement(127537607..127544760)
AA seq 230 aa
MLSGDIPPNQTIYINNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPKLRGQAWVVFA
EVTAASNAVRQMQRFPFYDKPMRIQYAKSKSDCVAKEDGTFVPREKKKKQEEKAAEKKRR
AEEAQQSAQTNGGMPCSQVPRQAKPGSQEPAAAPNNILFIQNLPHETTKMVLEILFQQYP
GFTEVRMIEAKPGIAFVEFSDDVQSSIAMQALQGFKITPQNPMAITYAKK
NT seq 693 nt   +upstreamnt  +downstreamnt
atgctttcaggcgatatcccccctaatcaaactatttacatcaacaatctgaatgagaag
gtcaagaaagaagaattgaaacggtctctctatgctttattttcacaatatggaagaatt
ttggatgttgtagccttgaagacaccaaagcttagaggccaggcatgggtggtctttgct
gaagtcacagctgctagtaatgcggtacgacaaatgcaaagattcccattctatgataaa
ccaatgagaattcaatatgcaaaatcaaaatctgattgtgttgcaaaagaggacggaaca
tttgttccaagagaaaagaagaagaagcaagaggaaaaagccgctgaaaagaaacgtcga
gctgaggaggcacaacaatctgcacaaactaatggagggatgccttgttctcaagttccc
cgtcaagccaagcccggttctcaggagcctgctgctgctccaaacaacatccttttcatc
cagaatttgccacacgaaacaacaaagatggtgctcgagatccttttccagcagtaccca
ggtttcactgaagttcggatgatcgaagccaagcctggtattgcctttgtggagttttct
gatgacgtgcagtcctccatcgcaatgcaagctctccaaggtttcaagatcactccccaa
aaccctatggccatcacctatgcaaagaaatga

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