Zingiber officinale (ginger): 121989660
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Entry
121989660 CDS
T08725
Name
(RefSeq) RHOMBOID-like protein 3 isoform X1
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zof01002
]
121989660
Enzymes [BR:
zof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
121989660
Peptidases and inhibitors [BR:
zof01002
]
Serine peptidases
Family S54: Rhomboid family
121989660
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
DER1
Motif
Other DBs
NCBI-GeneID:
121989660
NCBI-ProteinID:
XP_042399775
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Position
6B:134449731..134451311
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AA seq
326 aa
AA seq
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MEDVEPGTAAKRQAAGEAYYYQTAAAAMEEEEEERTWAPWLVPVFVLACVGVFVAEMYVN
NCPAHSHPLGSCVAGFLHRFSFQPVRQNPLLGPSSSTLEKMGALEWNRVVRRNQGWRLLS
CIWLHAGLVHLIVNMLSLIFIGIRLEQQFGFVRIGAIYILSGFGGAVLSALLLRNSISVG
ASGALFGLLGSMLSELITNWTIYSNRIAALLTLMIVIIINLAIGLFPSVDSFAHVGGFLS
GFLLGFVLLIRPQFGWFERDDLPPSAQVTSKYKAYQYVLLVFGLILFVAGFVVGLVMLFR
GVNGNDHCHWCHYLNCVPTSSWSCNN
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgtggagcctggcaccgctgcgaagcggcaagccgccggcgaagcgtattac
taccagacggcggcggcggcaatggaggaggaggaggaggagcggacgtgggcgccgtgg
ctggtcccggtcttcgtgctcgcgtgcgtgggcgtcttcgtggcggagatgtacgtcaac
aactgccccgcccattctcatcccctcggctcctgcgtcgccggcttcctccatcgcttc
tccttccagcccgtccggcagaaccctctcctcggcccctcctcctccaccttggagaag
atgggagctctcgaatggaacagagtagtccgccggaatcaaggttggaggctactatct
tgtatctggttgcacgccggcctcgtccatttgatcgtaaacatgctgagtttaatcttc
atcggcattcgtctcgaacagcaattcggattcgtccgcattggagcaatatacatactg
tcaggctttggcggtgctgttctttcagctcttctattaaggaatagcatttctgtgggt
gcttcaggagctttgtttgggcttcttggatcaatgctttcagagctcattacaaattgg
actatctactcgaataggattgcagctctgttaactctcatgattgttatcataatcaac
ttggccattggtttatttcctagtgtggatagctttgcccatgttggaggattcttatcg
ggtttccttctcggttttgttctgctaatccggcctcagtttggatggttcgagcgcgat
gatcttcccccttcggctcaagttacatccaagtataaagcctaccaatatgtcttgttg
gtatttggactcattttatttgtagctggatttgtcgttggcttagttatgctttttagg
ggagtgaacgggaacgaccactgtcattggtgccactacctaaattgtgtgccgacatcg
agttggagctgcaataactga
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