Zingiber officinale (ginger): 121989687
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Entry
121989687 CDS
T08725
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial-like
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121989687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zof03400
]
121989687
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
121989687
DNA repair and recombination proteins [BR:
zof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
121989687
Prokaryotic type
121989687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
LED_rpt
Motif
Other DBs
NCBI-GeneID:
121989687
NCBI-ProteinID:
XP_042399799
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All DBs
Position
6B:complement(134904481..134908355)
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AA seq
348 aa
AA seq
DB search
MVTLGTRDRKCMINVPNYLPGLPTSNPEAMASSSKALGELLRSPKRLRPISLSPESMTLK
SPLSTLHAPPLAAGEHPSALTSEQAKRAKRVDADRSLSRWKRNLSICSERIATRKGTHSD
PYVKLGELLVEETWLEALPGELQKPYAQNLCRFVEMEMRGSVPIYPPPHLIFNALHLTSF
DEVKAVIIGQDPYHGPGQAMGLAFSVPEGIKIPSSLRNMFKELQQDVGCSLPSHGNLERW
ALQGILLLNTALTVREHQANSHAKKGWEMFTDAIIQTISQRKTGVIFLLWGNYAQVKSRL
IDESKHHILMAAHPSGLSANRGFFGCRHFSQTNKILKRLGLSPIDWQL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggttacccttggaacgagggataggaaatgcatgataaatgtacccaattatttaccc
ggtcttccaacttccaatcccgaagccatggcttcctcctccaaagccctaggcgagctc
ctccgctcgccgaagcgtctccgcccgatctccctctccccggaatccatgaccctcaaa
tcccccctctcgaccctccacgcccctcctctcgccgccggtgaacacccctccgcactc
acatcggagcaggcgaagagggcgaagagggtcgacgccgaccgatccctttcccgatgg
aagcggaacctcagtatctgttccgaaaggatcgcgacaaggaaaggtactcattccgat
ccctatgtgaagctgggagagctcttggtcgaggagacatggctggaggctctccccggc
gagcttcagaaaccctacgcgcagaacctgtgcaggtttgtggagatggagatgcgcggc
agcgttcctatctaccctccgccccaccttatatttaatgctcttcatttgacttccttt
gatgaagtcaaggcagtcattattggacaggatccttaccatggacctggtcaagccatg
ggtcttgcattctcagtacccgagggcatcaagattccatcaagtttacgtaacatgttt
aaggaacttcaacaagatgttgggtgttccttgccatcacatggaaatttagagagatgg
gctttacagggaatcctgctgctgaatactgcccttacagttagggaacatcaggctaac
tcacatgctaagaaggggtgggagatgtttactgatgctattattcaaacaatttcccag
cggaaaacaggagttatcttccttctatggggcaactatgcccaagtaaaatctaggttg
attgacgagtcaaagcaccatatcctaatggctgctcatccatctggtctttctgctaac
agaggcttctttggatgcaggcacttctcgcagacgaataagatattgaagagacttggc
ctttctcccatcgattggcaactttaa
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