Zingiber officinale (ginger): 121989699
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Entry
121989699 CDS
T08725
Name
(RefSeq) serrate RNA effector molecule-like isoform X1
KO
K27103
serrate RNA effector molecule
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121989699
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
121989699
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
Motif
Other DBs
NCBI-GeneID:
121989699
NCBI-ProteinID:
XP_042399827
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Position
1B:complement(167569485..167579713)
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AA seq
737 aa
AA seq
DB search
MADVIDMPSEAPDRSGSIQTDQRESTTAGSPSPPLPPPPPRKRGRDSKEERDDWPPGRRN
DHRDSRDGSPPLSPPPPVSAPKDDKNREYRRRNSPSSPSYRDRRHPSPRRSPPHGPFKRA
RKDGGGYDRRRGSPRGGYGPDEKSSRYGYDYDRGYDRGGSGGRGWYGEERSQGRHGNRLS
YWPDSGHGSYGDDSETIQRGGLMSYKQFMQELEDDILPAEAERRYEEYRSEYISTQKRAY
FEAHKEEKWLKDKYHPTNLVVVIERRKELAKSIAKDFLLDLQSGTLDVGPGLTATSARKS
GNSSEPNSEEETDISGKRRRHGRGPAKENEQLSAAPKANPVSSEIRRIQIDILQAQALVR
KLDIEKGIQDNVLSSSDQDDADKTHGGSLGPIVIIRGLTTVKGLEGVELLDTLITYLWRV
HGLNYYGMSETSEAKGLRHVRADIKADGANSSGSEWEQKLDSFWQARLEGQDPLEILTAK
DKIDAAATEALDPVVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLKLKHPELVIEFT
SNVREDLYFQNYMNDPNAPGGTPIMQQSAPKARIQRRRLLDNRLRDAHGNRIELNRNRDD
DRNDSSPSDNHGGLDGETYEKPPYDAHRGGLHSAFPSDIPPPPILVPVPGAGPLGPFVPA
PPEVAMRMLTDPGGPSSFDTAGGLHGRKGRLGQQLGGTAAPILAMPPPFRHDPRRMRSYR
DLDAPDDEVTVLDYRSL
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtcatcgacatgccctcggaagctccggatcgtagcgggagcattcagacg
gaccagcgggagagcaccaccgcaggctctccctcgccgcctctgcctccgcctcctcca
aggaaaaggggcagggattcgaaggaggagagggacgactggcctcctggtcgtcggaac
gaccatcgtgactctagagacggctcgccgccgctttccccacctcctcccgtatcagcg
ccgaaggatgacaaaaatcgggagtatcgtaggcgcaatagccctagctctccttcatac
cgggaccgcagacacccgtctccccgacggtcgccgccgcacgggccatttaaacgagcc
aggaaggatggcggcggatacgaccggcgacgggggagcccgagagggggttacggtcca
gatgaaaaaagttccaggtatggttacgattatgatagggggtatgatcgaggtggctca
ggaggcagagggtggtatggggaggagaggtcacagggtcgtcatggtaatcgtctatca
tattggcctgattctggacatggcagttatggtgatgactctgaaactattcaaagggga
ggtttaatgtcatacaagcagttcatgcaagaacttgaagatgatattttacctgctgaa
gcagaacgcaggtatgaagaatatagatctgaatacatatccactcagaagcgagcatat
ttcgaagctcataaggaggaaaaatggttgaaagacaaatatcatccaactaatttagtg
gtagtgattgaaaggaggaaagaattggccaaatctattgcaaaagatttcctgctcgat
ttacagagtggaacacttgatgttggtccgggattaacagccacatctgctagaaaatct
gggaatagtagtgaaccaaactctgaagaagagacagatattagtgggaaaaggagaagg
catggtaggggacccgctaaagaaaatgaacagctttctgctgctcccaaggctaaccca
gtcagttctgagattcgccgaattcaaatagacatactacaagcacaagccttagtacgt
aagcttgatatagagaagggtatacaagataatgtcctttctagtagtgatcaagatgat
gcagataagacacatgggggatccttgggaccaattgtaattatacgcgggcttaccact
gtcaagggccttgagggtgttgaactactagacactttgattacttatctgtggcgtgtc
catggcttaaattattatggaatgtctgaaacttcagaagcaaaggggcttcggcatgtt
agagctgacattaaggctgatggagctaattctagtggttctgagtgggagcagaaactt
gattcattctggcaagcaaggctggaaggtcaggatcccttggaaatattgacagctaaa
gataagattgatgctgcagctactgaggccctagatcctgttgtgagaaaaataagagat
gaaaaatatggttggaagtatggatgtggagccaaaggttgcacaaagcttttccatgct
cctgaatttgtccataaacatctcaaactgaaacacccagaacttgtgattgaattcaca
tcaaatgttcgagaagacctttattttcaaaattatatgaatgatcccaatgcacctggt
ggaacacctatcatgcaacagtctgcaccaaaggcaagaatacaaagacggaggctgtta
gataatcgtcttagagatgcacatggcaaccgcatagagctcaacaggaatagagatgat
gacaggaatgacagctcacctagtgataaccatggtggtttggatggagaaacttatgag
aagcctccatatgatgcccacagggggggtttgcacagtgcttttccttcagacattcct
ccgccgcctatcttggtgcctgttcctggtgctggtccacttggacctttcgtgcctgcc
ccaccagaggtggctatgcgtatgcttactgatcctggtgggccgtcatcctttgatact
gctgggggtctacatggtagaaaaggacggcttggccagcaactaggtggcacagcagca
ccaattctcgctatgcctccaccttttcgacatgatccacgccgcatgaggagttacaga
gatctcgacgcaccagatgatgaagtcactgtactagactacaggagtttgtag
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